Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq20941 295 1e-77 seq3 288 2e-75 seq9317 246 5e-63 seq6 199 7e-49 seq8047 163 5e-38 seq7491 132 8e-29 seq110 125 1e-26 seq699 100 5e-19 >seq20941 Length=207 Score = 295 bits (326), Expect = 1e-77 Identities = 189/205 (92%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 12 ATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAA 71 ||||| || | | | || ||||||||||||||||||||||||||||||| |||||||||| Sbjct 1 ATTACTATCGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAA 59 Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| Sbjct 60 ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCA 119 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 179 Query 192 TGCCACAAGCCAGTTATCCCTGTGG 216 |||||||||||||||||||||| || Sbjct 180 TGCCACAAGCCAGTTATCCCTGCGG 204 >seq3 Length=8137 Score = 288 bits (318), Expect = 2e-75 Identities = 188/206 (91%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 || ||||| ||||||| |||| ||||| ||| || ||||||||||||||||||||||||| Sbjct 7285 TATTAAGCTGAATTACTATTGCGGCGA-GGTTATTAGTAGGGTAAAACTAACCTGTCTCA 7227 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||| |||| ||||||||||||| |||||||| |||| |||||||||||| Sbjct 7226 CGACGGTCTAAACCTAGCTTACGTTCCCTATTAATGGGTGAATAATCTAACGCTTACCGA 7167 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 7166 ATTCTGCTTCGGTATGATAGGAAGAGCCGATATCGAAGGATCAAAAAGCGACGTCGCTAT 7107 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||| |||| |||| Sbjct 7106 GAACGCTTGGCCGCCATAAGCTAGTT 7081 Score = 118 bits (130), Expect = 2e-24 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 |||||||| ||||||||||||| | ||||||||||| |||| |||||||| ||||||||| Sbjct 6694 TTATCCCTATGGTAACTTTTCTAGTACCTCTAGCCTTAAATATCGAGGGATTAAAGGATC 6635 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||| | ||||| ||||||| |||||| Sbjct 6634 GATAGGCTATACTTTTATGGTTTATATTCA 6605 >seq9317 Length=571 Score = 246 bits (272), Expect = 5e-63 Identities = 156/169 (92%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 569 TGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 510 Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || || Sbjct 509 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCGAA 450 Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 || ||| || ||||||||||| |||||||| |||||| |||| |||||| Sbjct 449 TTCCGAAGGTCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTC 401 >seq6 Length=2580 Score = 199 bits (220), Expect = 7e-49 Identities = 113/115 (98%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1235 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 1176 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 1175 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 1121 Score = 159 bits (176), Expect = 6e-37 Identities = 93/95 (98%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 202 CAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 738 CAGTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAG 679 Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||| Sbjct 678 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 644 Score = 145 bits (160), Expect = 1e-32 Identities = 88/92 (96%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1684 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1626 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 1625 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 1594 >seq8047 Length=1198 Score = 163 bits (180), Expect = 5e-38 Identities = 105/115 (91%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| |||||| |||| || |||||||||||||| |||||||||||||||||||||||| Sbjct 1004 TAGTAGGTGAATAATCTAATGCTTACCGAATTCTACTTCGGTATGATAGGAAGAGCCGAT 1063 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||| |||||||||||||||||| || ||||||||||||| Sbjct 1064 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTAGCCACCACAAGCCAGTT 1118 Score = 109 bits (120), Expect = 9e-22 Identities = 80/92 (87%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 || ||||| |||||| |||| ||||| |||||| ||||||||||||||||||| ||||| Sbjct 555 TATTAAGCTGAATTATTATTGCGGCGA-GGTCATTAGTAGGGTAAAACTAACCTATCTCA 613 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||| |||| | ||||||||| Sbjct 614 TGACGGTCTAAACCTAGCTTATATTCCCTATT 645 >seq7491 Length=992 Score = 132 bits (146), Expect = 8e-29 Identities = 86/93 (92%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 203 AGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261 |||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 713 AGTTCATCCCTATGGTAACTTTTCTAGCACCTCTAGCCTCAAATATCGAGGGACTAAAGG 654 Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||||||||||||||||| ||| |||||| Sbjct 653 ATCGATAGGCCACACTTTCATAATTTATATTCA 621 >seq110 Length=22202 Score = 125 bits (138), Expect = 1e-26 Identities = 83/91 (91%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--GGGACTAAAGGATC 264 |||||||||||||||||||||||||||||||||||| || | | |||||||||||||| Sbjct 2089 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGATGTTGCCGGGGACTAAAGGATC 2148 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||| |||||||||||||||||| ||||||| Sbjct 2149 GATAAGCCACACTTTCATGGTTTATATTCAC 2179 >seq699 Length=6954 Score = 100 bits (110), Expect = 5e-19 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||| ||| |||| |||||||||| | || |||||| ||||||| | | ||| Sbjct 5329 AATTCTACTTTAGTATAATAGGAAGAGTTAATATTAAAGGATTAAAAAGCGATATTACTA 5388 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 | || || | || | |||| | ||||| || | |||||||| | |||||||||| Sbjct 5389 TAAATATTTAACCGCTATAAGCTAATTATCTCTATAATAACTTTTTTAATACCTCTAGCC 5448 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | |||| | |||||||||||||| |||||| ||||| || |||| |||| Sbjct 5449 TTAAATATTAAGGGACTAAAGGATTAATAGGCTCTACTTTTATAGTTTATATT 5501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854210075424