Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq20941 295 1e-77
seq3 288 2e-75
seq9317 246 5e-63
seq6 199 7e-49
seq8047 163 5e-38
seq7491 132 8e-29
seq110 125 1e-26
seq699 100 5e-19
>seq20941
Length=207
Score = 295 bits (326), Expect = 1e-77
Identities = 189/205 (92%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 12 ATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAA 71
||||| || | | | || ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 ATTACTATCGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAA 59
Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131
||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||
Sbjct 60 ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCA 119
Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 179
Query 192 TGCCACAAGCCAGTTATCCCTGTGG 216
|||||||||||||||||||||| ||
Sbjct 180 TGCCACAAGCCAGTTATCCCTGCGG 204
>seq3
Length=8137
Score = 288 bits (318), Expect = 2e-75
Identities = 188/206 (91%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|| ||||| ||||||| |||| ||||| ||| || |||||||||||||||||||||||||
Sbjct 7285 TATTAAGCTGAATTACTATTGCGGCGA-GGTTATTAGTAGGGTAAAACTAACCTGTCTCA 7227
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||| |||| ||||||||||||| |||||||| |||| ||||||||||||
Sbjct 7226 CGACGGTCTAAACCTAGCTTACGTTCCCTATTAATGGGTGAATAATCTAACGCTTACCGA 7167
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 7166 ATTCTGCTTCGGTATGATAGGAAGAGCCGATATCGAAGGATCAAAAAGCGACGTCGCTAT 7107
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||| |||| |||| ||||
Sbjct 7106 GAACGCTTGGCCGCCATAAGCTAGTT 7081
Score = 118 bits (130), Expect = 2e-24
Identities = 80/90 (89%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264
|||||||| ||||||||||||| | ||||||||||| |||| |||||||| |||||||||
Sbjct 6694 TTATCCCTATGGTAACTTTTCTAGTACCTCTAGCCTTAAATATCGAGGGATTAAAGGATC 6635
Query 265 GATAGGCCACACTTTCATGGTTTGTATTCA 294
||||||| | ||||| ||||||| ||||||
Sbjct 6634 GATAGGCTATACTTTTATGGTTTATATTCA 6605
>seq9317
Length=571
Score = 246 bits (272), Expect = 5e-63
Identities = 156/169 (92%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 569 TGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 510
Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244
||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||
Sbjct 509 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCGAA 450
Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|| ||| || ||||||||||| |||||||| |||||| |||| ||||||
Sbjct 449 TTCCGAAGGTCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTC 401
>seq6
Length=2580
Score = 199 bits (220), Expect = 7e-49
Identities = 113/115 (98%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 1176
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1175 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 1121
Score = 159 bits (176), Expect = 6e-37
Identities = 93/95 (98%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 202 CAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 738 CAGTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAG 679
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||
Sbjct 678 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 644
Score = 145 bits (160), Expect = 1e-32
Identities = 88/92 (96%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1684 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1626
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 1625 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 1594
>seq8047
Length=1198
Score = 163 bits (180), Expect = 5e-38
Identities = 105/115 (91%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
|||| |||||| |||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct 1004 TAGTAGGTGAATAATCTAATGCTTACCGAATTCTACTTCGGTATGATAGGAAGAGCCGAT 1063
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|||||||||||||||||| |||||||||||||||||| || |||||||||||||
Sbjct 1064 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTAGCCACCACAAGCCAGTT 1118
Score = 109 bits (120), Expect = 9e-22
Identities = 80/92 (87%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|| ||||| |||||| |||| ||||| |||||| ||||||||||||||||||| |||||
Sbjct 555 TATTAAGCTGAATTATTATTGCGGCGA-GGTCATTAGTAGGGTAAAACTAACCTATCTCA 613
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||| |||| | |||||||||
Sbjct 614 TGACGGTCTAAACCTAGCTTATATTCCCTATT 645
>seq7491
Length=992
Score = 132 bits (146), Expect = 8e-29
Identities = 86/93 (92%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 203 AGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261
|||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 713 AGTTCATCCCTATGGTAACTTTTCTAGCACCTCTAGCCTCAAATATCGAGGGACTAAAGG 654
Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
||||||||||||||||||||| ||| ||||||
Sbjct 653 ATCGATAGGCCACACTTTCATAATTTATATTCA 621
>seq110
Length=22202
Score = 125 bits (138), Expect = 1e-26
Identities = 83/91 (91%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--GGGACTAAAGGATC 264
|||||||||||||||||||||||||||||||||||| || | | ||||||||||||||
Sbjct 2089 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGATGTTGCCGGGGACTAAAGGATC 2148
Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||| |||||||||||||||||| |||||||
Sbjct 2149 GATAAGCCACACTTTCATGGTTTATATTCAC 2179
>seq699
Length=6954
Score = 100 bits (110), Expect = 5e-19
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|||||| ||| |||| |||||||||| | || |||||| ||||||| | | |||
Sbjct 5329 AATTCTACTTTAGTATAATAGGAAGAGTTAATATTAAAGGATTAAAAAGCGATATTACTA 5388
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
| || || | || | |||| | ||||| || | |||||||| | ||||||||||
Sbjct 5389 TAAATATTTAACCGCTATAAGCTAATTATCTCTATAATAACTTTTTTAATACCTCTAGCC 5448
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| |||| | |||||||||||||| |||||| ||||| || |||| ||||
Sbjct 5449 TTAAATATTAAGGGACTAAAGGATTAATAGGCTCTACTTTTATAGTTTATATT 5501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854210075424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |