Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq6 623 3e-176
seq3 538 1e-150
seq7491 416 9e-114
seq9317 374 3e-101
seq21888 244 3e-62
seq5 178 4e-42
seq699 147 7e-33
seq382 118 3e-24
seq632 89.7 2e-15
>seq6
Length=2580
Score = 623 bits (690), Expect = 3e-176
Identities = 400/435 (92%), Gaps = 5/435 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 612 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 553
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 552 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 493
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || || |||| ||||||||||||
Sbjct 492 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCCAGCCCCGCTTCATTGA 435
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 434 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 378
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 377 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 318
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 317 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 258
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 257 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 198
Query 427 TGGCTACCTTAAGAG 441
|||||||||||||||
Sbjct 197 TGGCTACCTTAAGAG 183
>seq3
Length=8137
Score = 538 bits (596), Expect = 1e-150
Identities = 442/536 (82%), Gaps = 5/536 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| |||| ||||||||| ||||| ||||| ||||||||||| |||| |||||
Sbjct 6572 CTTTTATTCTATTAGAGATTTCTATTCTCTATGAGCCCCCCTTAGGATACCTATGTTATA 6513
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||| |||| |||||| | ||| ||||||||||||| | ||| || | |||| || ||
Sbjct 6512 GTTTAATAGATATGCCGCTCTAGCTAAACTCCCCACCTAATAATATCTTTAACCTGGGTC 6453
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||||||||||||||||| |||||| ||| || || | || |||||| ||| |
Sbjct 6452 AGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCTAGCCCCGCTTTATTAA 6395
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| ||| | ||||||||||||||| |||||||| ||||| || ||
Sbjct 6394 ATAAGTAAAAAAATAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCTACCTA 6338
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||| ||||| | || ||| | || | | |||||| ||||| || | |||||||
Sbjct 6337 TTCTATACCTCCTATATCTTTTTATAATATTAAATTAGAGTTAAGCTTAATAAGGTCTTC 6278
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
|||||| |||||| | |||||||||||||| ||| ||||||||||||||||||||||
Sbjct 6277 TTTCCCTATTGATTCTACTAAGCCCGTTCCCTTAGCTATGGTTTCGCTAGATAGTAGATA 6218
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
|||| ||||||||||||||||||| ||| |||||||||||||||||||| |||||| |||
Sbjct 6217 GGGATAGTGGGAATCTCGTTAATCTATTTATGCGCGTCACTAATTAGATAACGAGGTATT 6158
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 6157 TAGCTACCTTAAGAGAGTTATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 6098
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
||||||| ||||| |||||||| || |||||||| ||||||| || | ||||||||
Sbjct 6097 TCACTTTAACATTTAGAGCACTAGGTAGAAATCATATTGCGTTAATACCACTTTCT 6042
>seq7491
Length=992
Score = 416 bits (460), Expect = 9e-114
Identities = 354/435 (81%), Gaps = 5/435 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| ||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct 588 CTTTTATTCTACTAGAGATTTCTATTCTCTATGAGCCCCCCTTAGGATACCTACGTTATG 529
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||| |||| |||||||| ||| ||||||||||||| | ||| || ||||||||| ||
Sbjct 528 GTTTAATAGATATGCCGCCCTAGCTAAACTCCCCACCTAATAATATCTTCAACCCGGGTC 469
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| | | || || |||| |||||| ||| |
Sbjct 468 GGCCCGCGAAGGACCTTAAAACCAGAAGTTAGACGA--AAATCCAGCCCCGCTTTATTAA 411
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||| |||||||| ||| | ||||| |||||||||| |||||||| |||||||| ||
Sbjct 410 ATAAATAAAAAAATAATAGGAGTAGTAGTATTTCACTGGCGCCGAA---GCTCCCACCTA 354
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||| ||||| | || ||||| || | |||||||| |||||||| | |||||||
Sbjct 353 TTCTATACCTCCTATATCTTTTCATAATATTAAACTAGAGTTAAGCTCAATAAGGTCTTC 294
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
|||||||||| |||| ||||| || |||| ||| | ||||||||||||||||||||
Sbjct 293 TTTCCCCGCTAATTCTATTAAGCCTATTTCCTTAGCTATAGTTTCGCTAGATAGTAGATA 234
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
|||| ||| |||||||| |||||||||| || || | | ||||||||||||||||||||
Sbjct 233 GGGATAGTAGGAATCTCATTAATCCATTTATATGCATTATTAATTAGATGACGAGGCATT 174
Query 427 TGGCTACCTTAAGAG 441
| |||||||||||||
Sbjct 173 TAGCTACCTTAAGAG 159
>seq9317
Length=571
Score = 374 bits (414), Expect = 3e-101
Identities = 287/334 (86%), Gaps = 6/334 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 367 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 308
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 307 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 248
Query 127 GGCCCGCGAAG-GA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCAT 183
||||||||||| || |||| ||| ||| | || | ||| || ||||| ||||
Sbjct 247 GGCCCGCGAAGCGAGCCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCAC 190
Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243
|| ||||||||| |||| ||| ||||||||||||||||| |||| ||||||||||
Sbjct 189 GGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCAC 131
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 TTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 71
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337
|||||||||||||||||| |||||||||||||||
Sbjct 70 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCC 37
>seq21888
Length=215
Score = 244 bits (270), Expect = 3e-62
Identities = 137/138 (99%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 61
Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 62 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 121
Query 518 TCACATTGCGTCAACATC 535
||||||||||| ||||||
Sbjct 122 TCACATTGCGTAAACATC 139
>seq5
Length=2795
Score = 178 bits (196), Expect = 4e-42
Identities = 101/103 (98%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2463 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 2404
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2403 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2361
>seq699
Length=6954
Score = 147 bits (162), Expect = 7e-33
Identities = 295/435 (68%), Gaps = 7/435 (2%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| ||||| ||||||||| || | || || |||| |||||| || | |||| |
Sbjct 5537 TTTTATTCTACTAGAGATTTCTATTTTTTATAAGCCCCCTTTAGGATACTTATATTATAG 5596
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||| |||| | |||||| ||| ||||||| || | | ||| || | ||| ||
Sbjct 5597 TTTAATAGATATACCGCCCTAGCTAAACTCCTTACTTAATAATATCTTTAACTTAAATTA 5656
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTC-ATTGA 186
| ||||||| |||||||| ||||| | | || | | | || || ||| |
Sbjct 5657 GACCGCGAAAGACCTTAAAATTAGAAATTAAA---TAAAAATCTGGCCCTATTTTATTAA 5713
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||||| || | |||| | | |||| || ||| |||||
Sbjct 5714 TTAAGTAAAAAAATAATAAGAGTTATAAGATTTTATTAGCGCTAAA---GCTTTTACTTA 5770
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
|| || ||||| | || ||| | || | | |||||| ||||| || | | ||||
Sbjct 5771 TTTTATACCTCCTATATCTTTTTATAATATTAAATTAGAGTTAAGCTTAATAAAGCCTTC 5830
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
|||||| | |||| ||| ||||||| | |||||||||||||||| |||
Sbjct 5831 TTTCCCTATTAATTCTATTAAGTTTATTCCCTTAATAATAGTTTCGCTAGATAGTAAATA 5890
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
| | | | ||||||| |||||| ||| || | | ||||||||| | ||| |||
Sbjct 5891 GACATAATAGGAATCTTATTAATCTATTTATATATATTATTAATTAGATAATAAGGTATT 5950
Query 427 TGGCTACCTTAAGAG 441
| |||||||||||||
Sbjct 5951 TAGCTACCTTAAGAG 5965
>seq382
Length=7672
Score = 118 bits (130), Expect = 3e-24
Identities = 211/305 (69%), Gaps = 5/305 (2%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| | ||| ||||||||| ||||| || | ||| |||| || |||| |||| |
Sbjct 7357 TTTTATTTTACTAGAGATTTCTATTCTCTATAATCCCCTCTTAAGATACCTATATTATAG 7416
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||| |||| | | | ||| |||||||| |||| | ||| || | |||| ||
Sbjct 7417 TTTAATAGATATATCTATCTAGCTAAACTCCCTACCTAATAATATCTTTAACCTAAATTA 7476
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGAT 187
|||||||||||||||||| | ||||| | | || | || || || ||| |
Sbjct 7477 GCCCGCGAAGGACCTTAAAACTAGAAATTATAC--AAAAATCTAGCTCTATTTTATTAAA 7534
Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTAT 247
|||||||||||| ||||| || | ||||| | | ||| | |||| ||| ||||||
Sbjct 7535 TAAGTAAAAAAATAATAAGAGTTATAATATTTTATTAGCG-CTAAAC--CTCTTACTTAT 7591
Query 248 TCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCT 307
| || ||||| | || ||| | || | | |||||| ||||| || | |||||||
Sbjct 7592 TTTATACCTCCTATATCTTTTTATAATATTAAATTAGAGTTAAGCTTAATAAAGTCTTCT 7651
Query 308 TTCCC 312
|||||
Sbjct 7652 TTCCC 7656
>seq632
Length=9524
Score = 89.7 bits (98), Expect = 2e-15
Identities = 75/92 (82%), Gaps = 4/92 (4%)
Strand=Plus/Plus
Query 6 TCTTTTGCTCTACA----GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCG 61
||||||| |||||| | |||||||||||||| |||| |||| ||||||||||||||
Sbjct 521 TCTTTTGTTCTACATATGGAAGATTTCTGTTCTCGATGAACCCCCTTTAGGACACCTGCG 580
Query 62 TTATGGTTTAACAGATGTGCCGCCCCAGCCAA 93
|||| |||| | |||| | |||| |||||||
Sbjct 581 TTATAGTTTGATAGATTTATCGCCTCAGCCAA 612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634836511392
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