Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq6 623 3e-176 seq3 538 1e-150 seq7491 416 9e-114 seq9317 374 3e-101 seq21888 244 3e-62 seq5 178 4e-42 seq699 147 7e-33 seq382 118 3e-24 seq632 89.7 2e-15 >seq6 Length=2580 Score = 623 bits (690), Expect = 3e-176 Identities = 400/435 (92%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 612 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 553 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 552 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 493 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || || |||| |||||||||||| Sbjct 492 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCCAGCCCCGCTTCATTGA 435 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 434 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 378 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 377 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 318 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 317 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 258 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 257 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 198 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 197 TGGCTACCTTAAGAG 183 >seq3 Length=8137 Score = 538 bits (596), Expect = 1e-150 Identities = 442/536 (82%), Gaps = 5/536 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||| ||||||||| ||||| ||||| ||||||||||| |||| ||||| Sbjct 6572 CTTTTATTCTATTAGAGATTTCTATTCTCTATGAGCCCCCCTTAGGATACCTATGTTATA 6513 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||| |||| |||||| | ||| ||||||||||||| | ||| || | |||| || || Sbjct 6512 GTTTAATAGATATGCCGCTCTAGCTAAACTCCCCACCTAATAATATCTTTAACCTGGGTC 6453 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| |||||| ||| || || | || |||||| ||| | Sbjct 6452 AGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCTAGCCCCGCTTTATTAA 6395 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| ||| | ||||||||||||||| |||||||| ||||| || || Sbjct 6394 ATAAGTAAAAAAATAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCTACCTA 6338 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||| ||||| | || ||| | || | | |||||| ||||| || | ||||||| Sbjct 6337 TTCTATACCTCCTATATCTTTTTATAATATTAAATTAGAGTTAAGCTTAATAAGGTCTTC 6278 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||| |||||| | |||||||||||||| ||| |||||||||||||||||||||| Sbjct 6277 TTTCCCTATTGATTCTACTAAGCCCGTTCCCTTAGCTATGGTTTCGCTAGATAGTAGATA 6218 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||| ||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||| Sbjct 6217 GGGATAGTGGGAATCTCGTTAATCTATTTATGCGCGTCACTAATTAGATAACGAGGTATT 6158 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 | |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 6157 TAGCTACCTTAAGAGAGTTATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 6098 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 ||||||| ||||| |||||||| || |||||||| ||||||| || | |||||||| Sbjct 6097 TCACTTTAACATTTAGAGCACTAGGTAGAAATCATATTGCGTTAATACCACTTTCT 6042 >seq7491 Length=992 Score = 416 bits (460), Expect = 9e-114 Identities = 354/435 (81%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||| Sbjct 588 CTTTTATTCTACTAGAGATTTCTATTCTCTATGAGCCCCCCTTAGGATACCTACGTTATG 529 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||| |||| |||||||| ||| ||||||||||||| | ||| || ||||||||| || Sbjct 528 GTTTAATAGATATGCCGCCCTAGCTAAACTCCCCACCTAATAATATCTTCAACCCGGGTC 469 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| | | || || |||| |||||| ||| | Sbjct 468 GGCCCGCGAAGGACCTTAAAACCAGAAGTTAGACGA--AAATCCAGCCCCGCTTTATTAA 411 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||| |||||||| ||| | ||||| |||||||||| |||||||| |||||||| || Sbjct 410 ATAAATAAAAAAATAATAGGAGTAGTAGTATTTCACTGGCGCCGAA---GCTCCCACCTA 354 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||| ||||| | || ||||| || | |||||||| |||||||| | ||||||| Sbjct 353 TTCTATACCTCCTATATCTTTTCATAATATTAAACTAGAGTTAAGCTCAATAAGGTCTTC 294 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||| |||| ||||| || |||| ||| | |||||||||||||||||||| Sbjct 293 TTTCCCCGCTAATTCTATTAAGCCTATTTCCTTAGCTATAGTTTCGCTAGATAGTAGATA 234 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||| ||| |||||||| |||||||||| || || | | |||||||||||||||||||| Sbjct 233 GGGATAGTAGGAATCTCATTAATCCATTTATATGCATTATTAATTAGATGACGAGGCATT 174 Query 427 TGGCTACCTTAAGAG 441 | ||||||||||||| Sbjct 173 TAGCTACCTTAAGAG 159 >seq9317 Length=571 Score = 374 bits (414), Expect = 3e-101 Identities = 287/334 (86%), Gaps = 6/334 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 367 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 308 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 307 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 248 Query 127 GGCCCGCGAAG-GA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 ||||||||||| || |||| ||| ||| | || | ||| || ||||| |||| Sbjct 247 GGCCCGCGAAGCGAGCCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCAC 190 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || ||||||||| |||| ||| ||||||||||||||||| |||| |||||||||| Sbjct 189 GGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCAC 131 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 TTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 71 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 |||||||||||||||||| ||||||||||||||| Sbjct 70 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCC 37 >seq21888 Length=215 Score = 244 bits (270), Expect = 3e-62 Identities = 137/138 (99%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 61 Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 121 Query 518 TCACATTGCGTCAACATC 535 ||||||||||| |||||| Sbjct 122 TCACATTGCGTAAACATC 139 >seq5 Length=2795 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2463 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 2404 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2403 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2361 >seq699 Length=6954 Score = 147 bits (162), Expect = 7e-33 Identities = 295/435 (68%), Gaps = 7/435 (2%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| ||||| ||||||||| || | || || |||| |||||| || | |||| | Sbjct 5537 TTTTATTCTACTAGAGATTTCTATTTTTTATAAGCCCCCTTTAGGATACTTATATTATAG 5596 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| | |||||| ||| ||||||| || | | ||| || | ||| || Sbjct 5597 TTTAATAGATATACCGCCCTAGCTAAACTCCTTACTTAATAATATCTTTAACTTAAATTA 5656 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTC-ATTGA 186 | ||||||| |||||||| ||||| | | || | | | || || ||| | Sbjct 5657 GACCGCGAAAGACCTTAAAATTAGAAATTAAA---TAAAAATCTGGCCCTATTTTATTAA 5713 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||||| || | |||| | | |||| || ||| ||||| Sbjct 5714 TTAAGTAAAAAAATAATAAGAGTTATAAGATTTTATTAGCGCTAAA---GCTTTTACTTA 5770 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 || || ||||| | || ||| | || | | |||||| ||||| || | | |||| Sbjct 5771 TTTTATACCTCCTATATCTTTTTATAATATTAAATTAGAGTTAAGCTTAATAAAGCCTTC 5830 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||| | |||| ||| ||||||| | |||||||||||||||| ||| Sbjct 5831 TTTCCCTATTAATTCTATTAAGTTTATTCCCTTAATAATAGTTTCGCTAGATAGTAAATA 5890 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 | | | | ||||||| |||||| ||| || | | ||||||||| | ||| ||| Sbjct 5891 GACATAATAGGAATCTTATTAATCTATTTATATATATTATTAATTAGATAATAAGGTATT 5950 Query 427 TGGCTACCTTAAGAG 441 | ||||||||||||| Sbjct 5951 TAGCTACCTTAAGAG 5965 >seq382 Length=7672 Score = 118 bits (130), Expect = 3e-24 Identities = 211/305 (69%), Gaps = 5/305 (2%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| | ||| ||||||||| ||||| || | ||| |||| || |||| |||| | Sbjct 7357 TTTTATTTTACTAGAGATTTCTATTCTCTATAATCCCCTCTTAAGATACCTATATTATAG 7416 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| | | | ||| |||||||| |||| | ||| || | |||| || Sbjct 7417 TTTAATAGATATATCTATCTAGCTAAACTCCCTACCTAATAATATCTTTAACCTAAATTA 7476 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGAT 187 |||||||||||||||||| | ||||| | | || | || || || ||| | Sbjct 7477 GCCCGCGAAGGACCTTAAAACTAGAAATTATAC--AAAAATCTAGCTCTATTTTATTAAA 7534 Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTAT 247 |||||||||||| ||||| || | ||||| | | ||| | |||| ||| |||||| Sbjct 7535 TAAGTAAAAAAATAATAAGAGTTATAATATTTTATTAGCG-CTAAAC--CTCTTACTTAT 7591 Query 248 TCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCT 307 | || ||||| | || ||| | || | | |||||| ||||| || | ||||||| Sbjct 7592 TTTATACCTCCTATATCTTTTTATAATATTAAATTAGAGTTAAGCTTAATAAAGTCTTCT 7651 Query 308 TTCCC 312 ||||| Sbjct 7652 TTCCC 7656 >seq632 Length=9524 Score = 89.7 bits (98), Expect = 2e-15 Identities = 75/92 (82%), Gaps = 4/92 (4%) Strand=Plus/Plus Query 6 TCTTTTGCTCTACA----GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCG 61 ||||||| |||||| | |||||||||||||| |||| |||| |||||||||||||| Sbjct 521 TCTTTTGTTCTACATATGGAAGATTTCTGTTCTCGATGAACCCCCTTTAGGACACCTGCG 580 Query 62 TTATGGTTTAACAGATGTGCCGCCCCAGCCAA 93 |||| |||| | |||| | |||| ||||||| Sbjct 581 TTATAGTTTGATAGATTTATCGCCTCAGCCAA 612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634836511392