Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq6 233 3e-59
seq3 168 1e-39
seq8047 165 1e-38
>seq6
Length=2580
Score = 233 bits (258), Expect = 3e-59
Identities = 225/282 (80%), Gaps = 14/282 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1682 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1739
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1740 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1799
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | || ||| | |||||||| ||||| |
Sbjct 1800 GAACGCGGTGATAC-CACCCGCACGT-ACAGATGGACAAGAATAGGCCTCGGCTTAGCGT 1857
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||||||||| | | |||| || |||||||| | | | | | ||| ||
Sbjct 1858 CTTAGCAGGCGATTCTTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 1911
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 1912 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 1953
>seq3
Length=8137
Score = 168 bits (186), Expect = 1e-39
Identities = 154/189 (81%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61
||||||||||||||| |||||||| ||||| |||||||||||| || |||| ||||||
Sbjct 7284 TACGAGAGGAACCGCT-AATTCAGA-TAATTAGTTTTTGCGGCTATCCGACCGGGCAGTA 7341
Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
||||||||||||||||| || ||| || ||| ||||||||||||||||||||||| ||||
Sbjct 7342 CCGCGAAGCTACCATCTACTAGATAATAGCTAAACGCCTCTAAGTCAGAATCCATACCAG 7401
Query 122 AACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACC 181
|||| ||| || | | || |||||| || || | |||||||| ||||| | |
Sbjct 7402 AACGCGGTAATAC-CACCCGCACAT-ACAGATAGACAAGAATAGGCCTCGGCTTAGCGTC 7459
Query 182 TTAGCAGGC 190
|||||||||
Sbjct 7460 TTAGCAGGC 7468
>seq8047
Length=1198
Score = 165 bits (182), Expect = 1e-38
Identities = 153/189 (81%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61
||||||||||||||| || || ||| ||||| |||||||||||| || |||| || ||||
Sbjct 556 TACGAGAGGAACCGCTGATTT-AGA-TAATTAGTTTTTGCGGCTATCCGACCGGGTAGTG 499
Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
|||||||||||| |||| || ||| |||||| |||||||||||||||||||| |||| ||
Sbjct 498 CCGCGAAGCTACTATCTACTAGATAATGGCTAAACGCCTCTAAGTCAGAATCTATGCTAG 439
Query 122 AACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACC 181
|||| ||| || | | || |||| | ||| |||| |||||||| ||||| | |
Sbjct 438 AACGCGGTAATAC-CACCCGCACGT-ATAGATAGATAAGAATAGGCCTCGGCTTAGCGTC 381
Query 182 TTAGCAGGC 190
|||||||||
Sbjct 380 TTAGCAGGC 372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819023590656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |