Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 735 0.0 seq15761 396 8e-108 seq382 372 9e-101 seq8720 325 1e-86 seq699 147 7e-33 seq1994 105 2e-20 >seq3 Length=8137 Score = 735 bits (814), Expect = 0.0 Identities = 466/504 (92%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1255 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1254 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 1195 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 1194 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 1135 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| || || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1134 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 1075 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||| ||||||||||| ||||||| ||||| ||||| Sbjct 1074 CAAGGCCATGCGATTCGAGGAGTTATCATGAATCACCAGTAAGCCCCGGAGGGCATTGGT 1015 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| Sbjct 1014 TTTTAATCTAATAAATACATCCCTTCCGAAGTTGGGATTTTTAGCATGTATTAGCTCTAG 955 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| |||||| |||||||||||||||||||||||| || |||||| Sbjct 954 AATTACCACGGTTATCCAAGTAGTAGGGTACTATCAAATAAACGATAACTTATATAATGA 895 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 894 GCCGTTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 836 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 835 AGACAAGCATATGACTACTGGCAG 812 >seq15761 Length=395 Score = 396 bits (438), Expect = 8e-108 Identities = 316/373 (85%), Gaps = 12/373 (3%) Strand=Plus/Plus Query 141 ATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGA 200 ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| Sbjct 1 ATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCACTATCCTACCATCGA 60 Query 201 AAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTT 259 ||||||||||||||||||||||||||| | |||||||| | | |||| |||||| ||| Sbjct 61 AAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGATGGCCGTGCGATCCGTC 120 Query 260 AAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GGCGTTGGTTTTTTATCTAATA 313 |||||| |||||||| | | ||| | | || |||| | |||||||||||| Sbjct 121 GAGTTATCATGAATCATC--GCAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATA 178 Query 314 AATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGT 372 ||| || ||||||| ||||||||||||| | ||| ||||||||||||||||||| ||||| Sbjct 179 AATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGT 238 Query 373 TATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 432 ||||| ||||| || ||| |||||| |||| |||||||||||||||||||||||||||| Sbjct 239 TATCCGAGTAGT-AGATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGT 297 Query 433 TTCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 ||||| || | | ||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct 298 TTCACAGTCTGAATTTGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATA 357 Query 492 TGACTACTGGCAG 504 ||||||||||||| Sbjct 358 TGACTACTGGCAG 370 >seq382 Length=7672 Score = 372 bits (412), Expect = 9e-101 Identities = 385/503 (77%), Gaps = 1/503 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| | |||||||| | |||||||| Sbjct 4687 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAATATTTATTATTACTACCTC 4746 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | | |||||| |||||||| ||||||| || |||||||| ||| | ||||| ||| Sbjct 4747 CCTATATTGGGATTAGGTAATTTACGCGCCTACTACCTTCCTTAGATATAGTAGCTATTT 4806 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || |||||| |||| || |||| |||||| | ||||| || || || | Sbjct 4807 CTTAGGCTCTTTCTCTGGGGTCGAGCCCTAACCCTTTATTACCTATTATAACTATATTTA 4866 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | || | | |||||||||| |||||| |||||||| ||| ||| |||||||| Sbjct 4867 GCTAATACCTAAATATCGAAAGTTAATAGGGAAGAAATTTAAATAAACTATCGCCGGTAT 4926 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || |||| ||||||||| ||| || || ||||||| |||| || || Sbjct 4927 AAGGCTATATGATTTAAGGAGTTATTATAAATTACTAATAAGCCCCGGAGGGTATTAATT 4986 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||| | |||||||||| | | ||||||| || ||||||||||||| Sbjct 4987 TTTAATCTAATAAATATATCCCTTCCGAAATTAAGATTTTTAGTATATATTAGCTCTAGA 5046 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||| |||| ||| ||||||| |||||| || |||| || Sbjct 5047 ATTACTATAGTTATCTAAATAGTAGGGTATTATTAAATAAATAATAACTTATATAATAAG 5106 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| |||||| || |||| ||| |||||||||||| || || ||||||||||||| Sbjct 5107 CTATTTATAGTTTCGCTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTGA 5165 Query 482 GACAAGCATATGACTACTGGCAG 504 || ||| |||| |||||| |||| Sbjct 5166 GATAAGTATATAACTACTAGCAG 5188 >seq8720 Length=885 Score = 325 bits (360), Expect = 1e-86 Identities = 206/222 (93%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| || | |||||| |||| |||||||||||||||||| Sbjct 665 GTACTCATTCCAATTACCAGACTCATA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 723 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 724 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 783 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 784 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 843 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||||||||||||||||||||||||||||||||||| |||| Sbjct 844 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAATTTTG 885 >seq699 Length=6954 Score = 147 bits (162), Expect = 7e-33 Identities = 209/293 (71%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 200 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT 259 |||||| |||||| |||||||| |||||| || | ||||| || ||| Sbjct 1408 AAAGTTAATAGGGAAGAAATTTAAATGAATTATTATTAGTATAAGGCTATATAATTTAAG 1467 Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319 ||||||||| ||| | || ||||| ||||| || ||||| || ||||||||| | Sbjct 1468 GAGTTATTATAAATTATTAATAAGCCCTAAAGGGTATTAATTTTTAATTTAATAAATATA 1527 Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 379 |||||| |||| || |||||| || ||||||||||||||||| | ||||| Sbjct 1528 TCCCTTCTAAAGTTAGGATTTTTAATATATATTAGCTCTAGAATTATTATAATTATCTCA 1587 Query 380 GTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439 || ||| ||| ||| |||| || |||||| || |||| ||| ||| | ||| ||| Sbjct 1588 ATAATAAAGTATTATTAAATGAATAATAACTTATATAATAAGCTATTTATAATTTTACTA 1647 Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 |||| ||| ||||||||||| | || ||||||||||| ||| || |||| Sbjct 1648 TATA-ATTATTTATACTTAGATAGATATAGCTTAATCTTTAAGATAAATATAT 1699 >seq1994 Length=4706 Score = 105 bits (116), Expect = 2e-20 Identities = 275/414 (66%), Gaps = 8/414 (2%) Strand=Plus/Plus Query 12 AATTACAAGACCCAAAAGA-GCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCG 70 ||||| || ||| |||| | || || ||| |||||||| | | ||| || | | Sbjct 2452 AATTATAAAACCTAAAAAAAGCTCTATATTTATATTTATTATTATTACTTCTTTATATTA 2511 Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 ||||| ||||||| ||| | |||||||| ||| | |||| ||||| |||||| Sbjct 2512 GGATTAAGTAATTTATATACCTATTACCTTCCTTAGATATAATAGCTATTTCTTAGGCTC 2571 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTG--ATACCATGGTAGGCCACTA 188 | |||| | | | |||||| | | ||| || || | || ||| | | || Sbjct 2572 CTTCTCTAGGGTTAAGCCCTAACCCTCTATTATTTATTATAATTCTATT-TAG-CTAATA 2629 Query 189 TCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCA 248 | | || ||||| |||||| |||||||| ||| || || ||||| | Sbjct 2630 CCTAAATATTAGAAGTTAATAGGGAAGAAATTTAAATAAATTATTATTAATATAAGGCTA 2689 Query 249 TGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATC 308 | ||| ||||||||| ||| | || ||||| ||||| || ||||| ||| Sbjct 2690 TATAATTTAAGGAGTTATTATAAATTATTAATAAGCCCTAAAGGGTATTAATTTTTAATC 2749 Query 309 TAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCA 368 ||||||||| | ||||| |||| || |||||| || |||||||| |||||||| | Sbjct 2750 TAATAAATATATTCCTTCTAAAGTTAGGATTTTTAATATATATTAGCTTTAGAATTATTA 2809 Query 369 CGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGC 422 ||||| | ||| ||||||| ||| |||||| ||||| || |||| ||| Sbjct 2810 TAGTTATTTAAGTAATAAGGTATTATTAAATAA---ATAACATATATAATAAGC 2860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510064253184