Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4231 316 2e-81 seq3104 176 4e-39 >seq4231 Length=4255 Score = 316 bits (350), Expect = 2e-81 Identities = 1206/1856 (65%), Gaps = 54/1856 (3%) Strand=Plus/Minus Query 65102 GCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAG 65161 || || |||| || | || ||||||||||| ||||| ||||| | | | ||| Sbjct 4252 GCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCC-GAGCTTCCAGCCGGC 4194 Query 65162 AAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGACT 65219 ||| ||||| | || | || |||| | | || || || || || || | |||| Sbjct 4193 AAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACT 4135 Query 65220 GACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATA 65279 | |||||| ||| | ||| || || |||||||| | || || | || ||| | Sbjct 4134 GGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAA 4075 Query 65280 TCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGG 65338 ||||||||||||||||||| ||| | | | ||||| || || | |||| |||| Sbjct 4074 TCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGG 4016 Query 65339 ACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCG 65398 | ||||| ||||| || || || ||| | || ||||||| |||| || Sbjct 4015 ATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCA 3956 Query 65399 ATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGAC 65456 | ||| | |||| | || | | |||| ||| ||||||||||| | || ||||| | Sbjct 3955 ACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGC 3898 Query 65457 GGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAG 65516 | ||||||||||| ||| || || ||| | || ||||||| || || || | || Sbjct 3897 GCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAG 3838 Query 65517 TAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGT--TCATTTCAAT 65574 || ||||| ||||| || || | || || ||| || | |||| || || | Sbjct 3837 TACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCT 3778 Query 65575 GTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCAC 65632 | | ||| | ||| ||||||| ||| | | | | | | | || || |||| Sbjct 3777 GCTCCCTGAGG---TTC-TCCCAGTCCCAGA---GGTCA--GAAGGCTTC-ACATTCCAC 3728 Query 65633 ATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCC 65692 || || || || | || | ||| || || || ||| | ||| ||| Sbjct 3727 ATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCC 3668 Query 65693 TCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAAT 65751 ||||||||||| || || || | | | ||| || ||| || || |||||||| || Sbjct 3667 TCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGATAGTCTCGAAGAT 3609 Query 65752 GCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGT 65811 | || || ||||| ||||| |||| | ||||| | || | |||| Sbjct 3608 CTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGC 3549 Query 65812 GTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGC 65871 || || ||||| || || |||| ||| ||||| || || |||| ||| | || Sbjct 3548 ATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC 3489 Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931 || | |||||||||| || | |||||||| | |||| ||||| || || || Sbjct 3488 TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTG 3429 Query 65932 CACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGAC 65989 || ||||| ||| | | ||| ||| | || | |||| ||| || Sbjct 3428 TGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCATCATCGT-AGTTGATGA- 3376 Query 65990 ACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCG 66049 || || || ||||| ||||| || |||||||||||||| | ||| ||||| ||| Sbjct 3375 ---ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCG 3323 Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 ||||||| ||| |||||||| ||||| || || |||||||||| |||| || Sbjct 3322 CAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGG 3263 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || |||||||| ||||| |||||||| | |||| | || |||||||||| || Sbjct 3262 TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGC 3203 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229 | ||| | |||||| | ||| || | ||||||| || | | | |||| | Sbjct 3202 GCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCCGC 3144 Query 66230 CGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACAT 66286 | | || || | |||||| || ||||| | | | ||||| |||| ||||| Sbjct 3143 CTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCATAGCAGTCGGCCAGACCG 3086 Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346 || |||| || |||||||| || | ||| ||||| | || || ||||| ||| || Sbjct 3085 GGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAG 3026 Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGA 66406 ||||| || |||||||| || ||| || ||||| || || |||||| ||||||| Sbjct 3025 AGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGG 2966 Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466 || ||||||| ||| ||||||||||||| || || ||||| || || ||||||||||| Sbjct 2965 TTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCA 2906 Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526 || | || || ||| |||||| ||||||||||| || || |||||||||||| Sbjct 2905 AAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACA 2846 Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT 66586 || | ||| || || ||||| || | || ||||| || ||||| || || Sbjct 2845 CGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTG 2786 Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA- 66645 || || || ||| || || || || |||||||| ||| |||| ||||| ||||| Sbjct 2785 GCACGGATTCGGTGGACGTTTAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAG 2726 Query 66646 ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || | | | || |||| || |||||| ||| | || ||| | ||| ||| Sbjct 2725 GTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGC 2668 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 |||| || || || | ||| || | || |||||||||||| | || || || | Sbjct 2667 ATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA 2608 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 || | | || ||||| ||||| ||||| | |||| ||||| | || || | Sbjct 2607 AGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGA 2548 Query 66825 TCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATA 66883 | |||| | |||| ||||| | | || || || || || || | | | | || Sbjct 2547 TGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATC 2489 Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | | |||||| || || || ||||||| ||||||||| ||| | ||| || Sbjct 2488 TTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 2433 >seq3104 Length=5293 Score = 176 bits (194), Expect = 4e-39 Identities = 559/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| | Sbjct 1938 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1879 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || || || ||| | Sbjct 1878 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 1819 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| |||||||| ||||| | | || || Sbjct 1818 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 1759 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 1758 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1700 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 1699 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCTGC 1640 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 |||| | | | | ||||| ||||| ||||| || || | | | || ||| | Sbjct 1639 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTG-CATCCGCAAGAAGG 1584 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| |||| |||| || | |||| | | || | | Sbjct 1583 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 1526 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| | Sbjct 1525 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 1466 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| || |||||||| ||| ||| | || || || ||||| Sbjct 1465 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1406 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || || ||||| | || || | | | || | ||| | Sbjct 1405 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 1349 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 || || | || || | || || || || || || ||||| || ||||| Sbjct 1348 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 1289 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | ||| | | || |||||||||| | || ||| |||||| || || Sbjct 1288 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 1229 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || |||||||| || | |||| | || | || | |||| || | | || Sbjct 1228 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 1169 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || || || | ||||||||| || || |||||||| || Sbjct 1168 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 1109 Query 61917 TGTAGGCGACTATCA 61931 ||| || ||||| || Sbjct 1108 TGTCGGTGACTACCA 1094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397460292492560