Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4231 316 2e-81
seq3104 176 4e-39
>seq4231
Length=4255
Score = 316 bits (350), Expect = 2e-81
Identities = 1206/1856 (65%), Gaps = 54/1856 (3%)
Strand=Plus/Minus
Query 65102 GCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAG 65161
|| || |||| || | || ||||||||||| ||||| ||||| | | | |||
Sbjct 4252 GCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCC-GAGCTTCCAGCCGGC 4194
Query 65162 AAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGACT 65219
||| ||||| | || | || |||| | | || || || || || || | ||||
Sbjct 4193 AAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACT 4135
Query 65220 GACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATA 65279
| |||||| ||| | ||| || || |||||||| | || || | || ||| |
Sbjct 4134 GGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAA 4075
Query 65280 TCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGG 65338
||||||||||||||||||| ||| | | | ||||| || || | |||| ||||
Sbjct 4074 TCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGG 4016
Query 65339 ACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCG 65398
| ||||| ||||| || || || ||| | || ||||||| |||| ||
Sbjct 4015 ATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCA 3956
Query 65399 ATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGAC 65456
| ||| | |||| | || | | |||| ||| ||||||||||| | || ||||| |
Sbjct 3955 ACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGC 3898
Query 65457 GGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAG 65516
| ||||||||||| ||| || || ||| | || ||||||| || || || | ||
Sbjct 3897 GCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAG 3838
Query 65517 TAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGT--TCATTTCAAT 65574
|| ||||| ||||| || || | || || ||| || | |||| || || |
Sbjct 3837 TACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCT 3778
Query 65575 GTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCAC 65632
| | ||| | ||| ||||||| ||| | | | | | | | || || ||||
Sbjct 3777 GCTCCCTGAGG---TTC-TCCCAGTCCCAGA---GGTCA--GAAGGCTTC-ACATTCCAC 3728
Query 65633 ATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCC 65692
|| || || || | || | ||| || || || ||| | ||| |||
Sbjct 3727 ATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCC 3668
Query 65693 TCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAAT 65751
||||||||||| || || || | | | ||| || ||| || || |||||||| ||
Sbjct 3667 TCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGATAGTCTCGAAGAT 3609
Query 65752 GCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGT 65811
| || || ||||| ||||| |||| | ||||| | || | ||||
Sbjct 3608 CTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGC 3549
Query 65812 GTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGC 65871
|| || ||||| || || |||| ||| ||||| || || |||| ||| | ||
Sbjct 3548 ATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC 3489
Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931
|| | |||||||||| || | |||||||| | |||| ||||| || || ||
Sbjct 3488 TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTG 3429
Query 65932 CACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGAC 65989
|| ||||| ||| | | ||| ||| | || | |||| ||| ||
Sbjct 3428 TGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCATCATCGT-AGTTGATGA- 3376
Query 65990 ACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCG 66049
|| || || ||||| ||||| || |||||||||||||| | ||| ||||| |||
Sbjct 3375 ---ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCG 3323
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
||||||| ||| |||||||| ||||| || || |||||||||| |||| ||
Sbjct 3322 CAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGG 3263
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|| |||||||| ||||| |||||||| | |||| | || |||||||||| ||
Sbjct 3262 TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGC 3203
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229
| ||| | |||||| | ||| || | ||||||| || | | | |||| |
Sbjct 3202 GCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCCGC 3144
Query 66230 CGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACAT 66286
| | || || | |||||| || ||||| | | | ||||| |||| |||||
Sbjct 3143 CTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCATAGCAGTCGGCCAGACCG 3086
Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346
|| |||| || |||||||| || | ||| ||||| | || || ||||| ||| ||
Sbjct 3085 GGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAG 3026
Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGA 66406
||||| || |||||||| || ||| || ||||| || || |||||| |||||||
Sbjct 3025 AGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGG 2966
Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466
|| ||||||| ||| ||||||||||||| || || ||||| || || |||||||||||
Sbjct 2965 TTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCA 2906
Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526
|| | || || ||| |||||| ||||||||||| || || ||||||||||||
Sbjct 2905 AAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACA 2846
Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT 66586
|| | ||| || || ||||| || | || ||||| || ||||| || ||
Sbjct 2845 CGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTG 2786
Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA- 66645
|| || || ||| || || || || |||||||| ||| |||| ||||| |||||
Sbjct 2785 GCACGGATTCGGTGGACGTTTAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAG 2726
Query 66646 ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704
|| | | | || |||| || |||||| ||| | || ||| | ||| |||
Sbjct 2725 GTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGC 2668
Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764
|||| || || || | ||| || | || |||||||||||| | || || || |
Sbjct 2667 ATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA 2608
Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824
|| | | || ||||| ||||| ||||| | |||| ||||| | || || |
Sbjct 2607 AGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGA 2548
Query 66825 TCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATA 66883
| |||| | |||| ||||| | | || || || || || || | | | | ||
Sbjct 2547 TGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATC 2489
Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
| | | |||||| || || || ||||||| ||||||||| ||| | ||| ||
Sbjct 2488 TTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 2433
>seq3104
Length=5293
Score = 176 bits (194), Expect = 4e-39
Identities = 559/855 (65%), Gaps = 20/855 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| |
Sbjct 1938 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1879
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || | | || || || ||| |
Sbjct 1878 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 1819
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| |||||||| ||||| | | || ||
Sbjct 1818 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 1759
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||||||||||||||| ||
Sbjct 1758 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1700
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| ||
Sbjct 1699 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCTGC 1640
Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438
|||| | | | | ||||| ||||| ||||| || || | | | || ||| |
Sbjct 1639 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTG-CATCCGCAAGAAGG 1584
Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496
| || |||||| || ||||| |||| |||| || | |||| | | || | |
Sbjct 1583 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 1526
Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556
|| ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| |
Sbjct 1525 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 1466
Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616
||||| ||||| || ||||| || |||||||| ||| ||| | || || || |||||
Sbjct 1465 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1406
Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676
||| | || || ||||| | || || | | | || | ||| |
Sbjct 1405 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 1349
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
|| || | || || | || || || || || || ||||| || |||||
Sbjct 1348 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 1289
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
|| || | ||| | | || |||||||||| | || ||| |||||| || ||
Sbjct 1288 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 1229
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|| || |||||||| || | |||| | || | || | |||| || | | ||
Sbjct 1228 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 1169
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || |||||||| | || || || | ||||||||| || || |||||||| ||
Sbjct 1168 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 1109
Query 61917 TGTAGGCGACTATCA 61931
||| || ||||| ||
Sbjct 1108 TGTCGGTGACTACCA 1094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397460292492560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |