Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02]
428 sequences; 43,948,611 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq96 275 9e-72
seq2 105 1e-20
>seq96
Length=6529
Score = 275 bits (304), Expect = 9e-72
Identities = 201/229 (88%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 4267 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 4324
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 4325 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 4384
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||||||| |||| ||||| || |||| || | | |||||||||||||||||||
Sbjct 4385 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 4442
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 4443 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTNAAACTTCC 4491
>seq2
Length=2372785
Score = 105 bits (116), Expect = 1e-20
Identities = 111/144 (77%), Gaps = 3/144 (2%)
Strand=Plus/Minus
Query 82 CAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGG 140
||||| ||| |||| |||| | ||||| | |||| ||||||||||| |||| ||||
Sbjct 1832581 CAATGCTCTCTCCCACGGACGACGGAATTTAACAAGAATACCCGGACCTTTCGGGCAAG- 1832523
Query 141 TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT 200
|| | ||||| || | ||||||||| |||||||||| | |||| ||||||| ||||
Sbjct 1832522 -GAAATACTCGCTGGCTCCATCAGTGTCACGCGCGTGCGATCAAGAATATCTAAGAGCAT 1832464
Query 201 CACAGACCTGTTATTGCCTCAAAC 224
| ||||||||| || || |||||
Sbjct 1832463 CCCAGACCTGTATTTTCCCCAAAC 1832440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751996882020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |