Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq96 163 2e-38 seq4 71.6 8e-11 >seq96 Length=6529 Score = 163 bits (180), Expect = 2e-38 Identities = 107/117 (91%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || ||||||| |||||| || || Sbjct 4793 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTCC 4851 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4852 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 4908 >seq4 Length=4774899 Score = 71.6 bits (78), Expect = 8e-11 Identities = 47/52 (90%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||| |||||||||||||||| || | |||||||||||||||| ||||||||| Sbjct 4457790 TCCTTAGTCGGCATAGTTTATGGCTGAGACTACGACGGTATCCGATCGTCTT 4457739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398882920