Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 306 3e-78 seq9 214 1e-50 >seq6 Length=4141359 Score = 306 bits (338), Expect = 3e-78 Identities = 636/936 (68%), Gaps = 12/936 (1%) Strand=Plus/Plus Query 66011 AGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTG 66070 ||||| || |||||||||||||| | |||||||||||| ||||||| |||||| ||| Sbjct 1574245 AGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTG 1574304 Query 66071 CACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCA 66130 || || || || || ||||| || | |||| ||| || |||||||| ||||| ||| Sbjct 1574305 CAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCA 1574364 Query 66131 TCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAA 66190 |||||||| | |||| | || | ||||||||| |||| ||||| ||||||| |||| Sbjct 1574365 TCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAA 1574424 Query 66191 AGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAG 66249 || | ||||| | || | | | |||| | | | | ||| | | |||||| || Sbjct 1574425 AGCTTCTGAGCCTTGATTGT-CTTGCGACCCTTGCCCTCCTTCTCGAACTTTTCGTACAG 1574483 Query 66250 GTGTTCGAAGGATTCACCCCATACT--TCGGACAGACATGGACACTTGTGTGGACACATC 66307 ||||| | | | ||||| |||| || | || |||| || || |||||| Sbjct 1574484 AGCCTCGAAT--TCCTCTCCATAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATC 1574541 Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367 || | ||| ||||| | || ||| ||||| ||| || |||||||| ||||| ||||| Sbjct 1574542 AGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCA 1574601 Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 ||| ||||| || || || |||||| | || || || || || | || ||||| Sbjct 1574602 AGGAAAAGATCACGGGCACGGACCTCCTCCTTACCATGGTTCTTACGGAGATCAAGGAAA 1574661 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 || |||| || | ||||| || || ||||||||||| || | || || ||| | Sbjct 1574662 TCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCTGGTCGCTTGTTG 1574721 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 ||||| |||||||| || ||||| |||||||||||||| | ||| || || | || Sbjct 1574722 CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCA 1574781 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607 || ||| | || ||||| ||| ||||| || || || || ||| ||| ||||| Sbjct 1574782 TTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTT 1574841 Query 66608 AGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATA 66665 ||||| |||||||| ||| |||| ||||| ||||| || | | | || | | | Sbjct 1574842 AGACCGATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGA 1574899 Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725 | || ||||| ||| |||| || | | | |||| || | |||||| | | Sbjct 1574900 TTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAG 1574959 Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785 | ||| |||| |||||| ||||| | ||| ||||| ||| | | || |||||| || Sbjct 1574960 GGGTGCCGGCATTGAAGAGAGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGAT 1575019 Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATC 66844 |||| ||||| | ||| || || | || || || || | | |||| ||||| Sbjct 1575020 TGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATG 1575078 Query 66845 AGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCC 66904 | | || ||||| || |||| | | | | | || | | | ||| || || ||| Sbjct 1575079 ATCATGTGCTGAGGGCGCTCGATAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCC 1575138 Query 66905 AGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 | ||||||| |||||||| ||| | ||||||| Sbjct 1575139 AAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCG 1575174 >seq9 Length=3473953 Score = 214 bits (236), Expect = 1e-50 Identities = 569/859 (66%), Gaps = 28/859 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 1909335 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1909276 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | ||| | || ||| || Sbjct 1909275 TCCAAGGATCTCCACGACTGGAACAACCGCCTAACT---GCTGATGAGCAGTTCTTTGTC 1909219 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || | | || ||||| || || || || ||||||||||| ||||| | | || Sbjct 1909218 TCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAG 1909159 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 || ||| ||||| || | | ||||| ||||| ||||||||||||||||| Sbjct 1909158 CGATTCAGTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 1909099 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| | || || |||| ||| | |||||||| || ||||||| ||||| Sbjct 1909098 ATGGAGAACATTCATTCCGAGACCTACTCCCTCCTCATCGACACATACATCAAGGAGCCC 1909039 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437 || | || | | || | ||||| ||||| ||||| || || || | | |||| Sbjct 1909038 GCCCAGCG-AACCTATCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGA 1908984 Query 61438 --GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATT 61493 || || |||||| || ||||| |||| | || |||| | |||| | || | Sbjct 1908983 AGGCTGACTGGGCCATCCGATGGAT--CCAGGATAAGGGCTCCTCCTTTGCCCAGCGTCT 1908926 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | || |||||| | || |||||||| | || ||| | ||||| || Sbjct 1908925 CGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATCTTCTG 1908866 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || || || Sbjct 1908865 GCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGA 1908806 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672 |||||| | || ||| ||||| | || || || || | || | |||| Sbjct 1908805 CGAGGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTG 1908750 Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | || || | ||| || || || || || ||||| |||| Sbjct 1908749 CCAGCAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTTC 1908690 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 | || || ||| | ||| | ||| |||||||||| | || || ||| ||| || | Sbjct 1908689 TCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAATACA 1908630 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 |||| || || || || ||||| | |||| | | || | || | |||| || | | Sbjct 1908629 TTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCA 1908570 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 ||||| || || |||||||| | || || || | ||||||||| || || || |||| Sbjct 1908569 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTTGAGA 1908510 Query 61913 AACGTGTAGGCGACTATCA 61931 | ||||| | |||||| || Sbjct 1908509 AGCGTGTTGCCGACTACCA 1908491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565926185920