Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8 105 1e-20 seq1 89.7 8e-16 >seq8 Length=123571 Score = 105 bits (116), Expect = 1e-20 Identities = 111/144 (77%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 82 CAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGG 140 ||||| ||| |||| |||| | ||||| | |||| ||||||||||| |||| |||| Sbjct 120170 CAATGCTCTCTCCCACGGACGACGGAATTTAACAAGAATACCCGGACCTTTCGGGCAAG- 120228 Query 141 TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT 200 || | ||||| || | ||||||||| |||||||||| | |||| ||||||| |||| Sbjct 120229 -GAAATACTCGCTGGCTCCATCAGTGTCACGCGCGTGCGATCAAGAATATCTAAGAGCAT 120287 Query 201 CACAGACCTGTTATTGCCTCAAAC 224 | ||||||||| || || ||||| Sbjct 120288 CCCAGACCTGTATTTTCCCCAAAC 120311 >seq1 Length=1475703 Score = 89.7 bits (98), Expect = 8e-16 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||| || | | ||||||||||||| |||||||| |||||||| | | ||| |||||| Sbjct 1429138 ACTCGCTGGCTCCGTCAGTGTAGCGCGTGTGCGGCCTAGAACATCAAGGTGCAACACAGA 1429079 Query 207 CCTGTTATTGCCTCAAACTTCC 228 ||| ||||||||||||| |||| Sbjct 1429078 CCTCTTATTGCCTCAAAATTCC 1429057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751993377935