Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17]
909 sequences; 42,540,497 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq8 105 1e-20
seq1 89.7 8e-16
>seq8
Length=123571
Score = 105 bits (116), Expect = 1e-20
Identities = 111/144 (77%), Gaps = 3/144 (2%)
Strand=Plus/Plus
Query 82 CAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGG 140
||||| ||| |||| |||| | ||||| | |||| ||||||||||| |||| ||||
Sbjct 120170 CAATGCTCTCTCCCACGGACGACGGAATTTAACAAGAATACCCGGACCTTTCGGGCAAG- 120228
Query 141 TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT 200
|| | ||||| || | ||||||||| |||||||||| | |||| ||||||| ||||
Sbjct 120229 -GAAATACTCGCTGGCTCCATCAGTGTCACGCGCGTGCGATCAAGAATATCTAAGAGCAT 120287
Query 201 CACAGACCTGTTATTGCCTCAAAC 224
| ||||||||| || || |||||
Sbjct 120288 CCCAGACCTGTATTTTCCCCAAAC 120311
>seq1
Length=1475703
Score = 89.7 bits (98), Expect = 8e-16
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206
||||| || | | ||||||||||||| |||||||| |||||||| | | ||| ||||||
Sbjct 1429138 ACTCGCTGGCTCCGTCAGTGTAGCGCGTGTGCGGCCTAGAACATCAAGGTGCAACACAGA 1429079
Query 207 CCTGTTATTGCCTCAAACTTCC 228
||| ||||||||||||| ||||
Sbjct 1429078 CCTCTTATTGCCTCAAAATTCC 1429057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751993377935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |