Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq59 360 2e-94 seq279 214 1e-50 >seq59 Length=53314 Score = 360 bits (398), Expect = 2e-94 Identities = 1226/1882 (65%), Gaps = 54/1882 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| |||||||||||||| Sbjct 44180 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 44239 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||||||| ||| | ||| ||||| || | || |||| | | || | Sbjct 44240 CTTGAGGCCAAGCTTCCAGCCTGCGAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGGT 44298 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| ||||| |||||| ||| | ||| ||||| ||||||| Sbjct 44299 CCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAATGCACCTCGATCCGCAGCCA 44358 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACC 65311 | | || || | || || ||||||||||| ||||||||||| || ||||| | Sbjct 44359 TCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGT-CG 44417 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 || || || | ||||| ||| | |||||| ||||| ||||| || | Sbjct 44418 GCA---GGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTC 44474 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGA 65429 || | || ||||||| ||||| |||| ||| | |||| | || | | |||| | Sbjct 44475 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAA 44532 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| Sbjct 44533 CCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGC 44592 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || ||||||| ||||| |||| ||| ||||| ||||| ||||| | | || Sbjct 44593 ACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGAC 44652 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGT 65608 ||| || | |||| | | | | | || | | || ||||| | ||| | ||| Sbjct 44653 TGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAATCCCAGA--GGT 44709 Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 || | | | ||| |||||| || || ||| | || | || || ||| Sbjct 44710 C---CGAGGGCTTG-ACGTTCCACATGTCAAACTGGAGGATACCCTCAGATGCGGGAGAA 44765 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCG 65728 || ||| | ||| ||||||||||| || || || | || ||| || Sbjct 44766 CCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGCA 44825 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || ||||||||||||||| || | || || ||||| ||||| |||| | Sbjct 44826 GCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAG 44885 Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 ||||||| || | |||| ||||| || |||||||| |||| ||| || || || Sbjct 44886 GGCATACGCAGAGCAAGGAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATAGGTCGG 44945 Query 65849 TGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 || |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 44946 TGGCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCT 45003 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAA--ATG 65964 |||| ||||| | || || || || ||| | | ||| || | | | Sbjct 45004 TGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCGTAGCAAG 45063 Query 65965 TTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 || |||| || | || ||| || | ||||| || ||||| Sbjct 45064 CTTC-----ATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAGGCAAGGTT 45109 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||||||||| | |||||||||||| ||||||| |||||| ||||| || || || Sbjct 45110 GCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCT 45169 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || ||||| || | |||| ||| || |||||||| ||||| ||||||||||| | ||| Sbjct 45170 TCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCAT 45229 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | ||||||||| |||| ||||| ||||||| |||||| | ||||| Sbjct 45230 GAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTT 45289 Query 66205 CACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | || | | | |||| | | | | ||| | | |||||| || ||||| | Sbjct 45290 GATTGT-CTTGCGACCCTTGCCCTCCTTCTCGAACTTTTCGTACAGAGCCTCGAAT--TC 45346 Query 66264 CACCCCATACT--TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 | | ||||| |||| || | || |||| || || |||||||| | ||| ||||| Sbjct 45347 CTCTCCATAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACC 45406 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | || ||| ||||| ||| || |||||||| ||||| ||||| ||| ||||| || Sbjct 45407 GTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACG 45466 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || |||||| | || || || || || | || ||||| || |||| || | Sbjct 45467 GGCACGGACCTCCTCCTTACCATGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGA 45526 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 ||||| || || ||||||||||| || | || || ||| |||||| |||||||| Sbjct 45527 GTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCTGGTCGCTTGTTGCCACCCTGGTCGAC 45586 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 || ||||| |||||||||||||| | ||| || || | || || ||| | || || Sbjct 45587 ATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTT 45646 Query 66562 GGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621 ||| ||| ||||| || || || || ||| ||| ||||| ||||| |||||||| Sbjct 45647 GGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCGATACCACC 45706 Query 66622 GGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 ||| |||| ||||| ||||| || | | | || | | || || ||||| | Sbjct 45707 AGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTG 45764 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| || | | | |||| || | |||||| | || ||| |||| | Sbjct 45765 TCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTG 45824 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 ||||| ||||| | ||| ||||| ||| | | || |||||| |||||| ||||| | | Sbjct 45825 AAGAGAGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAG 45884 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858 || || || | || || || || | | |||| ||||| | | || ||||| Sbjct 45885 ACTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGG 45943 Query 66859 CCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918 || |||| | | | | | || | | | ||| || || |||| ||||||| || Sbjct 45944 GCGCTCGATAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCC 46003 Query 66919 AAAGTACGAGTAATTGAAATCG 66940 |||||| ||| | ||||||| Sbjct 46004 AAAGTATTGGTATTGGAAATCG 46025 >seq279 Length=355525 Score = 214 bits (236), Expect = 1e-50 Identities = 569/859 (66%), Gaps = 28/859 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 82424 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 82483 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | ||| | || ||| || Sbjct 82484 TCCAAGGATCTCCACGACTGGAACAACCGCCTAACT---GCTGATGAGCAGTTCTTTGTC 82540 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || | | || ||||| || || || || ||||||||||| ||||| | | || Sbjct 82541 TCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAG 82600 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 || ||| ||||| || | | ||||| ||||| ||||||||||||||||| Sbjct 82601 CGATTCAGTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 82660 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| | || || |||| ||| | |||||||| || ||||||| ||||| Sbjct 82661 ATGGAGAACATTCATTCCGAGACCTACTCCCTCCTCATCGACACATACATCAAGGAGCCC 82720 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437 || | || | | || | ||||| ||||| ||||| || || || | | |||| Sbjct 82721 GCCCAGCG-AACCTATCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGA 82775 Query 61438 --GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATT 61493 || || |||||| || ||||| |||| | || | || | |||| | || | Sbjct 82776 AGGCTGACTGGGCCATCCGATGGAT--CCAGGATAAGGACTCCTCCTTTGCCCAGCGTCT 82833 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | || |||||| | || |||||||| | || ||| | ||||| || Sbjct 82834 CGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATCTTCTG 82893 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || || || Sbjct 82894 GCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGA 82953 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672 |||||| | || ||| ||||| | || || || || | || | |||| Sbjct 82954 CGAGGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTG 83009 Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | || || | ||| || || || || || ||||| |||| Sbjct 83010 CCAGCAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTTC 83069 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 | || || ||| | ||| | ||| |||||||||| | || || ||| ||| || | Sbjct 83070 TCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAATACA 83129 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 |||| || || || || ||||| | |||| | | || | || | |||| || | | Sbjct 83130 TTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCA 83189 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 ||||| || || |||||||| | || || || | ||||||||| || || ||||||| Sbjct 83190 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGA 83249 Query 61913 AACGTGTAGGCGACTATCA 61931 | ||||| | |||||| || Sbjct 83250 AGCGTGTTGCCGACTACCA 83268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563595567760