Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1 163 2e-38 seq17504 78.8 5e-13 >seq1 Length=2777 Score = 163 bits (180), Expect = 2e-38 Identities = 107/117 (91%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| | |||||||| |||||| || || Sbjct 474 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACAGGTCAAAAT-ATAACACCGTCC 532 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 533 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 589 >seq17504 Length=205 Score = 78.8 bits (86), Expect = 5e-13 Identities = 59/68 (87%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| | |||||||| |||||| || || Sbjct 139 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACAGGTCAAAAT-ATAACACCGTCC 197 Query 61 GATCCCTA 68 |||||||| Sbjct 198 GATCCCTA 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278351213880