Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 2e-38
seq17504 78.8 5e-13
>seq1
Length=2777
Score = 163 bits (180), Expect = 2e-38
Identities = 107/117 (91%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| | |||||||| |||||| || ||
Sbjct 474 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACAGGTCAAAAT-ATAACACCGTCC 532
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 533 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 589
>seq17504
Length=205
Score = 78.8 bits (86), Expect = 5e-13
Identities = 59/68 (87%), Gaps = 1/68 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| | |||||||| |||||| || ||
Sbjct 139 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACAGGTCAAAAT-ATAACACCGTCC 197
Query 61 GATCCCTA 68
||||||||
Sbjct 198 GATCCCTA 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278351213880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |