Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq3 731 0.0
seq4999 80.6 1e-12
>seq3
Length=2799
Score = 731 bits (810), Expect = 0.0
Identities = 565/663 (85%), Gaps = 10/663 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 1974 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 1915
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1855
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1854 TGAAAAGAACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1795
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
| |||||||||| | |||| ||| || || ||| | |||||||||||| | |
Sbjct 1794 GTGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 1737
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||||| | | | | |||||||||| |||||||||||| |||| ||||
Sbjct 1736 CCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCGTCGGGAATGTGGCTCCCTCCGGG 1677
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||||| | | ||| | | | |||||||||| ||||| || ||
Sbjct 1676 GAGTGTTATAGCCCGGCGCGCAATACCCTGAGGC-GGACTGAGGTTCGCGCATTCGCAAG 1618
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | || | ||||||||| |||||||||||||||||| | |
Sbjct 1617 GATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 1559
Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 1558 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 1500
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| || ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1499 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCAT 1443
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
| | |||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 1442 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 1383
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||
Sbjct 1382 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 1323
Query 681 CGA 683
|||
Sbjct 1322 CGA 1320
>seq4999
Length=2546
Score = 80.6 bits (88), Expect = 1e-12
Identities = 82/105 (78%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 245 GGTGCACTCTTCTGCGGTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGG 303
||||| |||||| ||||| ||||||||||||| | | | | ||||||| | ||||
Sbjct 146 GGTGCGCTCTTC--CGGTCCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAAACGTCGGG 203
Query 304 AATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCG 348
|||||||| |||| ||||| ||||||||||| | ||| ||| ||
Sbjct 204 AATGTGGCTCCCTCCGGGGAGTGTTATAGCCTAGCGTGTAATACG 248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079599056600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |