Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq6 233 3e-59
seq3812 113 7e-23
>seq6
Length=1187
Score = 233 bits (258), Expect = 3e-59
Identities = 225/282 (80%), Gaps = 14/282 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 972 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 915
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 914 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 855
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | || ||| | |||||||| ||||| |
Sbjct 854 GAACGCGGTGATAC-CACCCGCACGT-ACAGATGGACAAGAATAGGCCTCGGCTTAGCGT 797
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||||||||| | | |||| || |||||||| | | | | | ||| ||
Sbjct 796 CTTAGCAGGCGATTCTTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 743
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 742 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 701
>seq3812
Length=5000
Score = 113 bits (124), Expect = 7e-23
Identities = 132/173 (76%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||| |||||||||||| |||| ||| |||||||||||| |||| || ||| || | |
Sbjct 3247 GTATGAGAGGAACCGCT-AATTTAGA-TAATTGGTTTTTATGGCTATCCGACTGGGTAAT 3304
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||| |||| ||||| || ||| || |||||||||| |||||| || |
Sbjct 3305 GCCGCGAAGCTATTATCTATTGGATAATAGCTAAATGCCTCTAAGTTAGAATCTATATTA 3364
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGC 173
||| | ||||| || || |||| | ||| |||| |||||||| |||||
Sbjct 3365 GAATGTAGTGATACT-ACCCGCACGT-ATAGATAGATAAGAATAGGCCTCGGC 3415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819051660288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |