Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq398 345 3e-90
seq1098 176 4e-39
>seq398
Length=19136
Score = 345 bits (382), Expect = 3e-90
Identities = 1222/1876 (65%), Gaps = 46/1876 (2%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | | ||| || |||| || | || ||||||||||| |||
Sbjct 15443 TCGACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTC 15384
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|| ||||| | | | ||| ||| ||||| | || | || |||| | | || |
Sbjct 15383 TTCAGGCC-GAGCTTCCAGCCGGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGT 15326
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || || | ||||| |||||| ||| | ||| || || |||||||
Sbjct 15325 CCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCA 15266
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | || || | || ||| |||||||||||||||||||| ||| | | | |||||
Sbjct 15265 TCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCG 15207
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
|| || | |||| ||||| ||||| ||||| || || || |||
Sbjct 15206 GCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATG 15147
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432
| || ||||||| |||| || | ||| | |||| | || | | |||| ||| |
Sbjct 15146 GCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCT 15089
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||| | || ||||| || ||||||||||| ||| || || ||| | |
Sbjct 15088 GGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACT 15029
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
| ||||||| || || || | |||| ||||| ||||| || || | || || ||
Sbjct 15028 CGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGT 14969
Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612
| || | |||| | | | | | || | | ||||||| ||| | | | |
Sbjct 14968 TGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGA---GGTCA- 14913
Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672
| | | || || |||||| || || || | || | ||| || || ||
Sbjct 14912 -GAAGGCTTC-ACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCT 14855
Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCA 65731
||| | ||| |||||||||||||| || || || | | | ||| || |||
Sbjct 14854 TGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCA 14796
Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791
|| ||||||||||| || | || || ||||| ||||| |||| | |||
Sbjct 14795 TGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGC 14736
Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851
|| | || | |||| || || ||||| || || |||| ||| ||||| || ||
Sbjct 14735 ATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGT 14676
Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911
|||| ||| | || || | |||||||||| || | |||||||| | |||
Sbjct 14675 CGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTC 14616
Query 65912 AAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAG 65969
| ||||| || || || || ||||| ||| | | ||| ||| | ||
Sbjct 14615 AGGTTGCGAACGACAACCTGTGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AG 14561
Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029
| |||| ||| || || || || ||||| ||||| || ||||||||||
Sbjct 14560 CATCATCGT-AGTTGATGA----ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGA 14510
Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089
|||| | ||| ||||| ||| ||||||| ||| |||||||| ||||| || || |
Sbjct 14509 CAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGA 14450
Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149
||||||||| |||| || || |||||||| ||||| |||||||| | |||| | |
Sbjct 14449 TGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGG 14390
Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCG 66209
| |||||||||| || | ||| | |||||| | ||| || | ||||||| |
Sbjct 14389 GGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGG 14330
Query 66210 TACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268
| | | | |||| | | | || || | |||||| || ||||| | | | |
Sbjct 14329 T-CTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGC 14273
Query 66269 CATACT--TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326
|||| |||| ||||| || |||| || |||||||| || | ||| ||||| | ||
Sbjct 14272 CATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCT 14213
Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386
|| ||||| ||| || ||||| || |||||||| || ||| || ||||| || |
Sbjct 14212 TCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGC 14153
Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446
| |||||| ||||||| || ||||||| ||| ||||||||||||| || || ||||
Sbjct 14152 GGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCC 14093
Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506
| || || ||||||||||| || | || || ||| |||||| ||||||||||| |
Sbjct 14092 AGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACC 14033
Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566
| || |||||||||||||| | ||| || || ||||| || | || ||||| |
Sbjct 14032 GGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGAGGTACCGTTGGTAC 13973
Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626
| ||||| || || || || || ||| || ||||| || |||||||| |||
Sbjct 13972 CAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCA 13913
Query 66627 TCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACC 66684
|||| ||||| ||||| || | | | || |||| || |||||| ||| |
Sbjct 13912 TCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTC 13855
Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744
|| || | ||| ||||||| || || || | ||| || | || ||||||
Sbjct 13854 TTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAG 13795
Query 66745 GGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGC 66804
|||||| | || || || ||| | | || |||||| ||||| ||||| | ||||
Sbjct 13794 GGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAGGTCTCCAGGACACG 13735
Query 66805 ATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTT 66863
||||| | || || || |||| | |||| ||||| | | || || || || |
Sbjct 13734 CTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCT 13676
Query 66864 CGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGT 66923
| || | | | | || | | | |||||| || || || ||||||| |||||||
Sbjct 13675 CAACAATCTTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGT 13616
Query 66924 ACGAGTAATTGAAATC 66939
|| ||| | ||| ||
Sbjct 13615 ACTGGTATTGGAAGTC 13600
>seq1098
Length=11580
Score = 176 bits (194), Expect = 4e-39
Identities = 559/855 (65%), Gaps = 20/855 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| |
Sbjct 9462 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 9521
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || | | || || || ||| |
Sbjct 9522 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 9581
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| |||||||| ||||| | | || ||
Sbjct 9582 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 9641
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||||||||||||||| ||
Sbjct 9642 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 9700
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| ||
Sbjct 9701 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCTGC 9760
Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438
|||| | | | | ||||| ||||| ||||| || || | | | || ||| |
Sbjct 9761 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTG-CATCCGCAAGAAGG 9816
Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496
| || |||||| || ||||| |||| |||| || | |||| | | || | |
Sbjct 9817 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 9874
Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556
|| ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| |
Sbjct 9875 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 9934
Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616
||||| ||||| || ||||| || |||||||| ||| ||| | || || || |||||
Sbjct 9935 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 9994
Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676
||| | || || ||||| | || || | | | || | ||| |
Sbjct 9995 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 10051
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
|| || | || || | || || || || || || ||||| || |||||
Sbjct 10052 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 10111
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
|| || | ||| | | || |||||||||| | || ||| |||||| || ||
Sbjct 10112 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 10171
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|| || |||||||| || | |||| | || | || | |||| || | | ||
Sbjct 10172 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 10231
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || |||||||| | || || || | ||||||||| || || |||||||| ||
Sbjct 10232 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 10291
Query 61917 TGTAGGCGACTATCA 61931
||| || ||||| ||
Sbjct 10292 TGTCGGTGACTACCA 10306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397477430530880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |