Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq33 354 1e-95 seq238 174 3e-41 >seq33 Length=4744 Score = 354 bits (392), Expect = 1e-95 Identities = 201/204 (99%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4652 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 4593 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 4592 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 4533 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 4532 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGGC 4473 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 4472 CACACTTTCATGGTTTGTATTCAC 4449 >seq238 Length=156084 Score = 174 bits (192), Expect = 3e-41 Identities = 163/206 (79%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| |||| ||| || | || ||||||||||| | ||| | Sbjct 57273 TACTAAGCTAAATTACTATTACAGCGA-GGTTATTAATAAAGTAAAACTAACTTATCTTA 57331 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | || ||||||||| |||| | |||||||||||| ||| ||||||| || |||||| || Sbjct 57332 TAACAGTCTAAACCTAGCTTATATTCCCTATTAGTAGGTAAACAATCTAATGCTTACTGA 57391 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| ||||| ||| |||||| | || |||||| ||||||| |||||||||| Sbjct 57392 ATTCTACTTTGGTATAATAAAAAGAGCTAATATTAAAGGATTAAAAAGCGACGTCGCTAT 57451 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| || |||| |||||| || Sbjct 57452 AAACGCTTAGCCGCCATAAGCCAATT 57477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397547872