Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq33 354 1e-95
seq238 174 3e-41
>seq33
Length=4744
Score = 354 bits (392), Expect = 1e-95
Identities = 201/204 (99%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4652 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 4593
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 4592 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 4533
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 4532 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGGC 4473
Query 272 CACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||
Sbjct 4472 CACACTTTCATGGTTTGTATTCAC 4449
>seq238
Length=156084
Score = 174 bits (192), Expect = 3e-41
Identities = 163/206 (79%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||| ||| |||| ||| || | || ||||||||||| | ||| |
Sbjct 57273 TACTAAGCTAAATTACTATTACAGCGA-GGTTATTAATAAAGTAAAACTAACTTATCTTA 57331
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
| || ||||||||| |||| | |||||||||||| ||| ||||||| || |||||| ||
Sbjct 57332 TAACAGTCTAAACCTAGCTTATATTCCCTATTAGTAGGTAAACAATCTAATGCTTACTGA 57391
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||| ||| ||||| ||| |||||| | || |||||| ||||||| ||||||||||
Sbjct 57392 ATTCTACTTTGGTATAATAAAAAGAGCTAATATTAAAGGATTAAAAAGCGACGTCGCTAT 57451
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||| || |||| |||||| ||
Sbjct 57452 AAACGCTTAGCCGCCATAAGCCAATT 57477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854397547872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |