Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq33 618 1e-174 seq248 138 4e-30 >seq33 Length=4744 Score = 618 bits (684), Expect = 1e-174 Identities = 399/435 (92%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||||||||||||||||||||| || |||| |||||||||||||||| Sbjct 4417 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGACCGCCTTCGGACACCTGCGTTATG 4358 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 4357 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 4298 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || || |||| |||||||||||| Sbjct 4297 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCCAGCCCCGCTTCATTGA 4240 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 4239 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 4183 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 4182 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 4123 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4122 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 4063 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4062 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 4003 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 4002 TGGCTACCTTAAGAG 3988 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 3608 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 3549 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3548 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 3506 >seq248 Length=2291965 Score = 138 bits (152), Expect = 4e-30 Identities = 293/435 (67%), Gaps = 7/435 (2%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| | ||| || |||||| ||||| || || | |||| | |||| |||| Sbjct 2145690 TTTTATTTTACTAGAAATTTCTATTCTCTATAAGACTACCTTTAAATACCTATATTATAA 2145631 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| | ||||| ||| |||||||| |||| | ||| || | |||| | Sbjct 2145630 TTTAATAGATATACCGCCTTAGCTAAACTCCCTACCTAATAATATCTTTAACCTAAGTTA 2145571 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACC-AGTTCCGCTTCATTGA 186 ||||||||||||||||| ||||| | | || | | || || ||| | Sbjct 2145570 ACCCGCGAAGGACCTTAAAATTAGAAATTAAA---TAAAAATCTAGCCTTAGTTTATTAA 2145514 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| |||| || | ||||| | | |||| || ||||| | ||| Sbjct 2145513 ATAAGTAAAAAAATAATAAAAATAATAATATTTTATTAGCGCTAAA---GCTCCTATTTA 2145457 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||| |||||| | || ||| | || | |||||||| ||||| || | ||| || Sbjct 2145456 TTCTATACCTCTTATATCTTTTTATAATATTAAACTAGAGTTAAGCTTAATAAGGTTTTT 2145397 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||| |||| |||| ||||||| ||| | |||| || ||| || ||| Sbjct 2145396 TTTCCCCGCTAATTCTATTAAGCTTATTCCCTTAGCTATAGTTTTATTAAATAATAAATA 2145337 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 | | | | |||||| |||||| ||| || | | |||||| || | ||| ||| Sbjct 2145336 GAAATAATAAGAATCTTATTAATCTATTTATATATATTATTAATTAAATAATAAGGTATT 2145277 Query 427 TGGCTACCTTAAGAG 441 | ||||||||||| Sbjct 2145276 TAATTACCTTAAGAG 2145262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635195306976