Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq33 618 1e-174
seq248 138 4e-30
>seq33
Length=4744
Score = 618 bits (684), Expect = 1e-174
Identities = 399/435 (92%), Gaps = 5/435 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| |||||||||||||||||||||| || |||| ||||||||||||||||
Sbjct 4417 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGACCGCCTTCGGACACCTGCGTTATG 4358
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 4357 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 4298
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || || |||| ||||||||||||
Sbjct 4297 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCCAGCCCCGCTTCATTGA 4240
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 4239 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 4183
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 4182 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 4123
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4122 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 4063
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4062 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 4003
Query 427 TGGCTACCTTAAGAG 441
|||||||||||||||
Sbjct 4002 TGGCTACCTTAAGAG 3988
Score = 178 bits (196), Expect = 4e-42
Identities = 101/103 (98%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3608 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 3549
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3548 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 3506
>seq248
Length=2291965
Score = 138 bits (152), Expect = 4e-30
Identities = 293/435 (67%), Gaps = 7/435 (2%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| | ||| || |||||| ||||| || || | |||| | |||| ||||
Sbjct 2145690 TTTTATTTTACTAGAAATTTCTATTCTCTATAAGACTACCTTTAAATACCTATATTATAA 2145631
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||| |||| | ||||| ||| |||||||| |||| | ||| || | |||| |
Sbjct 2145630 TTTAATAGATATACCGCCTTAGCTAAACTCCCTACCTAATAATATCTTTAACCTAAGTTA 2145571
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACC-AGTTCCGCTTCATTGA 186
||||||||||||||||| ||||| | | || | | || || ||| |
Sbjct 2145570 ACCCGCGAAGGACCTTAAAATTAGAAATTAAA---TAAAAATCTAGCCTTAGTTTATTAA 2145514
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| |||| || | ||||| | | |||| || ||||| | |||
Sbjct 2145513 ATAAGTAAAAAAATAATAAAAATAATAATATTTTATTAGCGCTAAA---GCTCCTATTTA 2145457
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||| |||||| | || ||| | || | |||||||| ||||| || | ||| ||
Sbjct 2145456 TTCTATACCTCTTATATCTTTTTATAATATTAAACTAGAGTTAAGCTTAATAAGGTTTTT 2145397
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
|||||||||| |||| |||| ||||||| ||| | |||| || ||| || |||
Sbjct 2145396 TTTCCCCGCTAATTCTATTAAGCTTATTCCCTTAGCTATAGTTTTATTAAATAATAAATA 2145337
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
| | | | |||||| |||||| ||| || | | |||||| || | ||| |||
Sbjct 2145336 GAAATAATAAGAATCTTATTAATCTATTTATATATATTATTAATTAAATAATAAGGTATT 2145277
Query 427 TGGCTACCTTAAGAG 441
| |||||||||||
Sbjct 2145276 TAATTACCTTAAGAG 2145262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635195306976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |