Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09]
187 sequences; 43,110,459 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq139 266 5e-69
seq25 75.2 2e-11
>seq139
Length=7974
Score = 266 bits (294), Expect = 5e-69
Identities = 201/231 (87%), Gaps = 7/231 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 2455 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2512
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 2513 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 2572
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG-- 177
|||||||||| |||| ||||| || |||| || | | ||||||||| |||||||
Sbjct 2573 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGAGCGCGTGTG 2630
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2631 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2681
>seq25
Length=464541
Score = 75.2 bits (82), Expect = 2e-11
Identities = 65/80 (81%), Gaps = 2/80 (3%)
Strand=Plus/Plus
Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
|||||||||||| | || ||||| || || | ||| | | |||||| ||||| ||||
Sbjct 109096 TTACCCGGACCTTTTGGACAAGGAAGTA--CTGGCTGACTCCGTCAGTGCAGCGCCCGTG 109153
Query 178 CGGCCCAGAACATCTAAGGG 197
||||||||||||||||||||
Sbjct 109154 CGGCCCAGAACATCTAAGGG 109173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751998637705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |