Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq139 266 5e-69 seq25 75.2 2e-11 >seq139 Length=7974 Score = 266 bits (294), Expect = 5e-69 Identities = 201/231 (87%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 2455 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2512 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 2513 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 2572 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG-- 177 |||||||||| |||| ||||| || |||| || | | ||||||||| ||||||| Sbjct 2573 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGAGCGCGTGTG 2630 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2631 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2681 >seq25 Length=464541 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/80 (81%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||||||||||| | || ||||| || || | ||| | | |||||| ||||| |||| Sbjct 109096 TTACCCGGACCTTTTGGACAAGGAAGTA--CTGGCTGACTCCGTCAGTGCAGCGCCCGTG 109153 Query 178 CGGCCCAGAACATCTAAGGG 197 |||||||||||||||||||| Sbjct 109154 CGGCCCAGAACATCTAAGGG 109173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998637705