Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09]
187 sequences; 43,110,459 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq139 695 0.0
>seq139
Length=7974
Score = 695 bits (770), Expect = 0.0
Identities = 559/664 (84%), Gaps = 13/664 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 1575 TGTAAAGTTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 1516
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1515 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1456
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1455 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 1396
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | ||| ||| | || ||| || ||||||| ||| | |
Sbjct 1395 ATGACCAGACTTG-GCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAG 1340
Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
| |||||||||||||| | | | |||||||| | |||||||||||| | ||||||
Sbjct 1339 TCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGACTTCGGGAATGTGGCTCTCTTCGG 1280
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380
|| ||||||||||||| ||| ||| | | | |||||||||| ||||| | || |
Sbjct 1279 GGAGTGTTATAGCCCGTTGTGTAATAC-CCTGGGGGGGACTGAGGTTCGCGCATCTGCAA 1221
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||||||||||| | | || ||||||||| |||||||||||||||||| |
Sbjct 1220 GGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 1162
Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 1161 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 1102
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1101 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 1046
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 1045 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 986
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||
Sbjct 985 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 926
Query 680 GCGA 683
||||
Sbjct 925 GCGA 922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079995988850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |