Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09]
187 sequences; 43,110,459 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq139 354 1e-95
>seq139
Length=7974
Score = 354 bits (392), Expect = 1e-95
Identities = 238/261 (91%), Gaps = 5/261 (2%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTG--CGGCCCAGAACATCTAAGGGCATCAC 58
|||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 2597 TACTCGCTGGCTCCGTCAGTGTAGAGCGCGTGTGCGGCCCAGAACATCTAAGGGCATCAC 2656
Query 59 AGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA 118
||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||
Sbjct 2657 AGACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCA 2715
Query 119 GCCACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | ||| || | || |||||||||||||||||||||||||||||||||||| ||
Sbjct 2716 GCGTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAA 2774
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
|||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 2775 TTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCA 2834
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||||||||||
Sbjct 2835 AGAAAGAGCTCTCAATCTGTC 2855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798556547
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |