Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09]
187 sequences; 43,110,459 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq139 430 2e-118
seq25 78.8 2e-12
>seq139
Length=7974
Score = 430 bits (476), Expect = 2e-118
Identities = 283/311 (91%), Gaps = 4/311 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 2764 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2705
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2704 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2645
Query 140 GATGTTCTGGGCCG--CACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
|||||||||||||| ||||||| |||||||||| |||||| ||||| | | ||||| |
Sbjct 2644 GATGTTCTGGGCCGCACACGCGCTCTACACTGACGGAGCCAGCGAGTACTT--CCTTGTC 2587
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2586 CGAAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTAT 2527
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct 2526 TGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 2467
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 2466 TGCCCTTTGTA 2456
>seq25
Length=464541
Score = 78.8 bits (86), Expect = 2e-12
Identities = 66/80 (83%), Gaps = 2/80 (3%)
Strand=Plus/Minus
Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193
|||||||||||||||||||||||| ||||| ||||||| ||| || | ||| | | |||
Sbjct 109173 CCCTTAGATGTTCTGGGCCGCACGGGCGCTGCACTGACGGAGTCAGCCAGTACTT--CCT 109116
Query 194 TGGCCGGAAGGTCTGGGTAA 213
|| || |||||| ||||||
Sbjct 109115 TGTCCAAAAGGTCCGGGTAA 109096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947198228736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |