Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq139 430 2e-118 seq25 78.8 2e-12 >seq139 Length=7974 Score = 430 bits (476), Expect = 2e-118 Identities = 283/311 (91%), Gaps = 4/311 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 2764 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2705 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2704 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2645 Query 140 GATGTTCTGGGCCG--CACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 |||||||||||||| ||||||| |||||||||| |||||| ||||| | | ||||| | Sbjct 2644 GATGTTCTGGGCCGCACACGCGCTCTACACTGACGGAGCCAGCGAGTACTT--CCTTGTC 2587 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 || |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2586 CGAAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTAT 2527 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| Sbjct 2526 TGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 2467 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 2466 TGCCCTTTGTA 2456 >seq25 Length=464541 Score = 78.8 bits (86), Expect = 2e-12 Identities = 66/80 (83%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193 |||||||||||||||||||||||| ||||| ||||||| ||| || | ||| | | ||| Sbjct 109173 CCCTTAGATGTTCTGGGCCGCACGGGCGCTGCACTGACGGAGTCAGCCAGTACTT--CCT 109116 Query 194 TGGCCGGAAGGTCTGGGTAA 213 || || |||||| |||||| Sbjct 109115 TGTCCAAAAGGTCCGGGTAA 109096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198228736