Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09]
835 sequences; 43,096,072 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq72 161 1e-37
seq128 100 4e-19
>seq72
Length=2094
Score = 161 bits (178), Expect = 1e-37
Identities = 124/142 (87%), Gaps = 4/142 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCA-GGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59
|||||||||||| |||||||| ||||||| |||| ||||||| |||||||||||| |||
Sbjct 1951 GTACAAAGGGCAAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT- 2008
Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGAT 118
|||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||
Sbjct 2009 CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGAT 2068
Query 119 TACCCGGACCTGTCGGCCAAGG 140
||||||||||| |||| |||||
Sbjct 2069 TACCCGGACCTTTCGGACAAGG 2090
>seq128
Length=1559
Score = 100 bits (110), Expect = 4e-19
Identities = 55/55 (100%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 55
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751993917025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |