Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq72 161 1e-37 seq128 100 4e-19 >seq72 Length=2094 Score = 161 bits (178), Expect = 1e-37 Identities = 124/142 (87%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCA-GGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59 |||||||||||| |||||||| ||||||| |||| ||||||| |||||||||||| ||| Sbjct 1951 GTACAAAGGGCAAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT- 2008 Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGAT 118 |||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||| Sbjct 2009 CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGAT 2068 Query 119 TACCCGGACCTGTCGGCCAAGG 140 ||||||||||| |||| ||||| Sbjct 2069 TACCCGGACCTTTCGGACAAGG 2090 >seq128 Length=1559 Score = 100 bits (110), Expect = 4e-19 Identities = 55/55 (100%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751993917025