Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09]
835 sequences; 43,096,072 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq72 693 0.0
seq718 78.8 4e-12
>seq72
Length=2094
Score = 693 bits (768), Expect = 0.0
Identities = 559/665 (84%), Gaps = 13/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTC-GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAA 81
||| ||| |||||| |||||||||||| |||||||||||| ||||||||||||||||| |
Sbjct 1071 TGTAAAGTTCCTTCCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATA 1012
Query 82 TTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1011 TGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 952
Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 951 ATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTT 892
Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCG 260
| |||||||||| | ||| ||| | || ||| || ||||||| ||| |
Sbjct 891 TATGACCAGACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CA 835
Query 261 GT-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319
|| |||||||||||||| | | | |||||||| | |||||||||||| | |||||
Sbjct 834 GTCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGACTTCGGGAATGTGGCTCTCTTCG 775
Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379
||| ||||||||||||| ||| ||| | | | |||||||||| ||||| | ||
Sbjct 774 GGGAGTGTTATAGCCCGTTGTGTAATAC-CCTGGGGGGGACTGAGGTTCGCGCATCTGCA 716
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| | | || ||||||||| |||||||||||||||||| |
Sbjct 715 AGGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 657
Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 656 TTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 597
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 596 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 541
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 540 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 481
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||
Sbjct 480 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 421
Query 679 GGCGA 683
|||||
Sbjct 420 GGCGA 416
>seq718
Length=342138
Score = 78.8 bits (86), Expect = 4e-12
Identities = 107/147 (73%), Gaps = 7/147 (5%)
Strand=Plus/Minus
Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG 508
|||||| || |||||||||| ||| | || |||||| || || || |
Sbjct 218314 AGTGTTCGGATGTCAAACCCCGATACGTGAAGAC--TGAACGCAGATGAGAGCTTC---- 218261
Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568
|| ||| |||||||||||| |||||| | |||| |||||||| ||||||| | || |
Sbjct 218260 GGCGCATCATCGACCGATCTTGATGTTCTAGGATAGATTTGAGGAAGAGCACACGTG-TC 218202
Query 569 GGACCCGAAAGATGGTGAACTATGCCT 595
|||||||| ||| ||| |||| |||||
Sbjct 218201 GGACCCGAGAGAAGGTTAACTGTGCCT 218175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079982089250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |