Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09]
835 sequences; 43,096,072 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq342 237 3e-60
>seq342
Length=1664
Score = 237 bits (262), Expect = 3e-60
Identities = 226/282 (80%), Gaps = 14/282 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 983 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1040
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1041 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1100
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | ||| |||| | |||||||||||||| |
Sbjct 1101 GAACGCGGTGATAC-CACCCGCACGT-ATAGACGGACAAGAATAGGCTTCGGCTTAGTGT 1158
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||||||||| | | |||| || |||||| | | | | | | ||| ||
Sbjct 1159 CTTAGCAGGCGATTCTTCCACGGCGCTC-----GAAGCGTGTCGTGGT-ATTTCGCGTAT 1212
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 1213 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 1254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819193373440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |