Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq555 693 0.0 seq2864 82.4 3e-13 >seq555 Length=1970 Score = 693 bits (768), Expect = 0.0 Identities = 559/665 (84%), Gaps = 13/665 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 499 TGTAAAGTTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 558 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 559 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 618 Query 143 TGAAAAGCACTTTGGAAAGAGAGTT-AAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201 |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| | Sbjct 619 TGAAAAGCACTTTGAAAAGAGAGTTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTT 678 Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGCG 260 | |||||||||| | ||| ||| | || ||| || ||||||| ||| | Sbjct 679 TATGACCAGACTTGGGCTTGGTTAATCATCTGGGGTTCTCC-CCAGTGCACTTTTC--CA 735 Query 261 GTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319 ||| ||||||||||||| | | | |||||||| | |||||||||||| | ||||| Sbjct 736 GTCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGACTTCGGGAATGTGGCTCTCTTCG 795 Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379 ||| ||||||||||||| ||| ||| | | | |||||||||| ||||| | || Sbjct 796 GGGAGTGTTATAGCCCGTTGTGTAATACC-CTGGGGGGGACTGAGGTTCGCGCATCTGCA 854 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||||||||||| | | || ||||||||| |||||||||||||||||| | Sbjct 855 AGGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTCGT-C 913 Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| | Sbjct 914 TTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 973 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 974 AGCTTC----GGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 1029 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1030 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 1089 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || || Sbjct 1090 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 1149 Query 679 GGCGA 683 ||||| Sbjct 1150 GGCGA 1154 >seq2864 Length=77123 Score = 82.4 bits (90), Expect = 3e-13 Identities = 108/147 (73%), Gaps = 7/147 (5%) Strand=Plus/Minus Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG 508 |||||| || |||||||||| ||| | || |||||| || || || | Sbjct 63917 AGTGTTCGGATGTCAAACCCCGATACGTGAAGAC--TGAACGCAGATGAGAGCTTC---- 63864 Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568 || ||| |||||||||||| |||||| | |||| |||||||| ||||||| || || | Sbjct 63863 GGCGCATCATCGACCGATCTTGATGTTCTAGGATAGATTTGAGGAAGAGCACAGGTG-TC 63805 Query 569 GGACCCGAAAGATGGTGAACTATGCCT 595 |||||||| ||| ||| |||| ||||| Sbjct 63804 GGACCCGAGAGAAGGTTAACTGTGCCT 63778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079936529450