Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09]
2,959 sequences; 43,499,819 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq555 693 0.0
seq2864 82.4 3e-13
>seq555
Length=1970
Score = 693 bits (768), Expect = 0.0
Identities = 559/665 (84%), Gaps = 13/665 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 499 TGTAAAGTTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 558
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 559 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 618
Query 143 TGAAAAGCACTTTGGAAAGAGAGTT-AAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201
|||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct 619 TGAAAAGCACTTTGAAAAGAGAGTTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTT 678
Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGCG 260
| |||||||||| | ||| ||| | || ||| || ||||||| ||| |
Sbjct 679 TATGACCAGACTTGGGCTTGGTTAATCATCTGGGGTTCTCC-CCAGTGCACTTTTC--CA 735
Query 261 GTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319
||| ||||||||||||| | | | |||||||| | |||||||||||| | |||||
Sbjct 736 GTCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGACTTCGGGAATGTGGCTCTCTTCG 795
Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379
||| ||||||||||||| ||| ||| | | | |||||||||| ||||| | ||
Sbjct 796 GGGAGTGTTATAGCCCGTTGTGTAATACC-CTGGGGGGGACTGAGGTTCGCGCATCTGCA 854
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| | | || ||||||||| |||||||||||||||||| |
Sbjct 855 AGGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTCGT-C 913
Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 914 TTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 973
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 974 AGCTTC----GGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 1029
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1030 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 1089
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||
Sbjct 1090 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 1149
Query 679 GGCGA 683
|||||
Sbjct 1150 GGCGA 1154
>seq2864
Length=77123
Score = 82.4 bits (90), Expect = 3e-13
Identities = 108/147 (73%), Gaps = 7/147 (5%)
Strand=Plus/Minus
Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG 508
|||||| || |||||||||| ||| | || |||||| || || || |
Sbjct 63917 AGTGTTCGGATGTCAAACCCCGATACGTGAAGAC--TGAACGCAGATGAGAGCTTC---- 63864
Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568
|| ||| |||||||||||| |||||| | |||| |||||||| ||||||| || || |
Sbjct 63863 GGCGCATCATCGACCGATCTTGATGTTCTAGGATAGATTTGAGGAAGAGCACAGGTG-TC 63805
Query 569 GGACCCGAAAGATGGTGAACTATGCCT 595
|||||||| ||| ||| |||| |||||
Sbjct 63804 GGACCCGAGAGAAGGTTAACTGTGCCT 63778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079936529450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |