Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2917 342 4e-89 seq362 197 1e-45 >seq2917 Length=53793 Score = 342 bits (378), Expect = 4e-89 Identities = 1222/1881 (65%), Gaps = 52/1881 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| ||||||||||| || Sbjct 48104 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGT 48045 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||||||| ||| || | ||| ||||| | || | || |||| | | || Sbjct 48044 CTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGG 47987 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 47986 TCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 47927 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | || | || || |||||||| || ||||| ||||| | | | || || Sbjct 47926 ATCTGGACGACCTGGCGCTGAGAGATCTCCCAAACAGTCTTATACAGA-GCCTTGACATC 47868 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | || ||| ||||| ||||| || ||| Sbjct 47867 GGCAGGGATGTTGGGAATGTTCTGAATGGATCCATTCTCAGCAATGATGCGGTTCTTCAT 47808 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 47807 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 47750 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| | Sbjct 47749 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 47690 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| |||| ||| ||||| ||||| ||||| | | | | Sbjct 47689 TCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGTAGACTG 47630 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | | | | || | | || ||||||| ||| | | | Sbjct 47629 TTGCGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTC 47574 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | ||| |||||| || || || | || | ||| || ||||| Sbjct 47573 AGAG--GGCTTG-ACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGGGAACC 47517 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGG 65729 ||| | ||| ||||| ||||| || || || || | | || || || | Sbjct 47516 CTTGAAGGTGGAGTAGGGACCCTCTTCCTTAGCCAGCTGCACGGAGGCAGTC-AGCGCAG 47458 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 | |||||||||||| ||||| | ||| || ||||| ||||| | |||| | | Sbjct 47457 CGTGATAAATGGTCTCAAAAATCTGCTTATTGAGCTCACGAGCCTCGGGGGACTCGAAGG 47398 Query 65790 GCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGAT 65849 |||| | || | |||| ||||| ||||| ||||| |||| ||| ||||| || | Sbjct 47397 GCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCAAGACCAATGGGTCGGT 47338 Query 65850 GACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCG 65907 | |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 47337 GGCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTT 47280 Query 65908 ATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTT 65967 |||| ||||| | || || || || ||| | | ||| || | Sbjct 47279 GTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCG-------T 47227 Query 65968 AGGACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 || | | |||| || | || ||| || | ||||| || |||| Sbjct 47226 AGCAAGCCTCATCGTAGTTGATG---------AAGGAGGGCAGAGATAGAGAGGCAAGGT 47176 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 ||||||| || | ||||||||| || ||||||| |||||| ||||| ||||| || Sbjct 47175 TGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGATTGGAGC 47116 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 || ||||| || | |||| ||| ||||||||||| ||||| ||||| ||||| | || Sbjct 47115 TTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCTTTGTAGAGCA 47056 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 || | || | ||||||||| |||| ||||| ||||||| |||||| | |||| Sbjct 47055 TGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCT 46996 Query 66204 TCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262 | | ||| | | | |||| | | | ||||| | |||||| || ||||| Sbjct 46995 TGATCGT-CTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCC 46937 Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 || || | |||| || | || |||| | || ||||| || | ||| ||||| Sbjct 46936 TCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGTCCAGTCACCG 46877 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | || ||| ||||| |||||| |||||||| ||||| ||||| ||| || || || Sbjct 46876 TTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGG 46817 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || |||||| | ||||| || || || | || |||||||| |||| || | Sbjct 46816 GCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAG 46757 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 ||||| || || ||||||||||| || | || || ||| |||||| |||||||| Sbjct 46756 TGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACA 46697 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 || ||||| |||||||||||||| | ||| || |||| ||||| ||| | || ||| Sbjct 46696 TACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGATGTACCGTTG 46637 Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 || ||| ||||| || || || || ||| ||| |||||||||||||||||||| Sbjct 46636 GTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACCAATACCACCA 46577 Query 66623 GCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGT 66680 ||| |||| ||||| ||||| || | | | || | | || || ||||| || Sbjct 46576 GCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGT 46519 Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 | |||| || | | | |||| || | |||||| | || ||| |||| || Sbjct 46518 CGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGA 46459 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800 |||| ||||| | ||| ||||| ||| | | || ||||| ||||| ||||| | || Sbjct 46458 AGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGA 46399 Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGC 66859 | || || | || || || || | | |||| ||||| | | || || || Sbjct 46398 CTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGTGGG 46340 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 || ||||| | | | | | || | | | ||| || || |||| ||||||| ||| Sbjct 46339 CGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCA 46280 Query 66920 AAGTACGAGTAATTGAAATCG 66940 ||||| ||| | ||||||| Sbjct 46279 AAGTATTGGTATTGGAAATCG 46259 >seq362 Length=14512 Score = 197 bits (218), Expect = 1e-45 Identities = 566/860 (66%), Gaps = 28/860 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | || | Sbjct 11364 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 11423 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 || || || | | |||||| | || | | || ||| || ||| | Sbjct 11424 TCTAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 11483 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||| ||||| ||||| | | || || Sbjct 11484 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGA 11543 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||||||||||||||||||||| ||| Sbjct 11544 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATG 11603 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| | ||||| |||| ||| | |||||||| || || |||| ||||| || Sbjct 11604 GAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCC 11663 Query 61384 GAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | || | | | | ||||| ||||| ||||| || || || | | |||| | Sbjct 11664 CAGCG-AACCTACCTTTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGAAGG 11718 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| ||| | || | || | |||| |||| | | Sbjct 11719 CTGACTGGGCCATCCGATGGAT--CCAAGATAAGGACTCTTCCTTTGCCCAACGCCTCGT 11776 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || || || | || |||||| | || |||||||| | || ||| | || || ||| | Sbjct 11777 TGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATTTTCTGGCT 11836 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| |||||||||||| || ||| | || || || ||||| Sbjct 11837 CAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGA 11896 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || ||| ||||| ||| || | || || | || | |||| Sbjct 11897 GGGTCTTCACACTGACTTTGC----CTGC--CTCCTCCACTCTCACCT-AAAGGGCCGTG 11949 Query 61677 GGAG-GAGCGTGTGGGT---GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 || ||| || | || || | ||| || || || || |||||||| || | Sbjct 11950 CCAGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCC 12009 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 | ||||| ||| | ||| | || |||||||||| | || || ||| |||||| | Sbjct 12010 TCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 12069 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 |||| || || || || ||||| | |||| | | || | || | |||| || | | Sbjct 12070 TTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCA 12129 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 ||||| || || |||||||| | || || || | |||||||| || || ||||||| Sbjct 12130 CCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGA 12189 Query 61913 AACGTGTAGGCGACTATCAA 61932 | ||||| | |||||| ||| Sbjct 12190 AGCGTGTTGCCGACTACCAA 12209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553662579760