Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq633 107 7e-18 >seq633 Length=23273 Score = 107 bits (118), Expect = 7e-18 Identities = 216/315 (69%), Gaps = 4/315 (1%) Strand=Plus/Minus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 |||||||||| ||| || |||||||| | | ||| || ||||| || | ||||||||| Sbjct 13051 AACATCGTAATAGATGACGTTCATGCCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 12992 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || || || | ||||| |||| || || | || || | ||| Sbjct 12991 AATGTGACCGTAGCCAACGATGCCCAAAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 12933 Query 12853 AGTC-TTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | | |||||||| ||||| |||| | || ||| || || |||| |||||| | || Sbjct 12932 TGACTTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGGTCGCCAAGCTGACGGGCAA 12873 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTT-GCAAAAGGGAGAA 12970 || || | | | |||| ||||| || || || | | ||| || |||||| || Sbjct 12872 GAACGATGATCTCGGCGATGACCAGCTCAGCGACACTGCGCGAGTTGGCGAAAGGG-GAG 12814 Query 12971 TTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATG 13030 || ||||| || || || |||| || | || || | ||||| | | || || Sbjct 12813 TTGAAGACGGCGATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTGCCGATA 12754 Query 13031 CAGAAGCATCCTATG 13045 |||||||| || ||| Sbjct 12753 CAGAAGCAGCCGATG 12739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884814939833387