Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16] 1,359 sequences; 49,118,876 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq109 145 2e-32 >seq109 Length=47872 Score = 145 bits (160), Expect = 2e-32 Identities = 203/279 (73%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| |||||| ||| ||||||||||||||| | |||||||| Sbjct 36525 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 36466 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||| Sbjct 36465 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 36406 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGT-TAGC 182 || | | |||| ||||||| || ||||||| ||| || | | | | || || Sbjct 36405 CCCTCA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAGTATATT 36347 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTT 241 ||| ||| |||||| |||||||||||||| | |||||| |||||| | | ||| Sbjct 36346 TAATTATATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTCTATACTTAGATTTTT 36287 Query 242 CGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | ||| ||| ||||||||||||| | |||||||||| Sbjct 36286 AATCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 36248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260782865728