Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16]
1,359 sequences; 49,118,876 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq574 443 4e-122
seq472 159 7e-37
>seq574
Length=7252
Score = 443 bits (490), Expect = 4e-122
Identities = 284/309 (92%), Gaps = 2/309 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 5410 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 5351
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5350 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 5291
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||
Sbjct 5290 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 5233
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5232 AAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 5173
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 5172 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 5113
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 5112 CCCTTTGTA 5104
>seq472
Length=3275154
Score = 159 bits (176), Expect = 7e-37
Identities = 117/136 (86%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||| || | ||||||||| ||||||||||||||| ||||||||| |||||||| ||| ||
Sbjct 2333731 TTGTCCAGGAGGTCTGGGCAATCTTGTTAAACTCCGTCGTGCTGTGGATAGAGTATTTCA 2333672
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
| ||||||||||||||||| ||| |||||||||||| ||| ||||| | |||||| ||
Sbjct 2333671 ACTATTGCTCTTCAACGAGCAATCCCTAGTAAGCGCAAGTCGTCAGCTTGTGTTGATCAC 2333612
Query 313 GTCCCTGCCCTTTGTA 328
|||||| |||||||||
Sbjct 2333611 GTCCCTTCCCTTTGTA 2333596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947187127552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |