Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq109 297 2e-75 seq193 172 4e-38 >seq109 Length=515286 Score = 297 bits (328), Expect = 2e-75 Identities = 1128/1746 (65%), Gaps = 42/1746 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | |||||| |||| || | || ||||||||||| || Sbjct 357616 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 357557 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| || ||| ||||| | || | || |||| | | || Sbjct 357556 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 357499 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| |||||| ||| | |||||| || |||||| Sbjct 357498 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 357439 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | | | || || |||||||| || ||||||||||| | | | | ||| Sbjct 357438 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 357380 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | |||| ||||| ||||| | ||||| ||||| || ||| Sbjct 357379 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 357320 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||| | ||||| |||| ||||| |||| ||| | | |||| || Sbjct 357319 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 357262 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | || || || || ||||||||||| ||| || |||||| || Sbjct 357261 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 357202 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | ||| || || ||||| ||||| || | || | Sbjct 357201 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 357142 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | |||| | | | | | || | ||||||| ||| | ||| Sbjct 357141 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 357084 Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 | | ||||| | ||||| || || || | || | ||| || || | Sbjct 357083 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 357030 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728 | ||| | ||| || ||||||||||| ||||| |||| | | || || Sbjct 357029 CCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAGACGTAGTA-AGGGCA 356971 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || || ||||||||||| || | || || ||||| |||||| ||| | Sbjct 356970 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 356911 Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 ||||| | | | ||| | || || |||||||| || |||| ||| ||||| || Sbjct 356910 GGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGG 356851 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 ||||||| ||| | ||||| | |||||||||| |||| ||||| || Sbjct 356850 TGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTG 356791 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTT 65967 ||||||||||| || || || || ||| ||| | | ||| || | Sbjct 356790 TTCAAATTGCGGACAACAACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG-------T 356739 Query 65968 AGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG-CAAGAGATGCGAGGTTG 66025 || | | ||| | | | | ||| ||| || | |||| || || |||||| Sbjct 356738 AGCAAGCATCTTCATAGTTG------ATAAAAGAGGGCAGAGACAAG-GAGGCAAGGTTG 356686 Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085 || ||||| | ||| ||||| ||| || || | || || |||||||| || || Sbjct 356685 CAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAGCTT 356626 Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145 || ||||| || | |||| ||| ||||||||||||||||| ||||||||| | |||| Sbjct 356625 CGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGCATG 356566 Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205 | || | |||||||| |||| ||||| ||||||| |||||| | ||||| Sbjct 356565 AAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTG 356506 Query 66206 ACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 | | || | | |||| ||| | | ||||| | |||||| || || || || Sbjct 356505 ATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTC 356447 Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324 ||| | || | || | || || | || || ||||| || | ||| || || | Sbjct 356446 ACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTT 356387 Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384 || ||||| ||| || |||||||| ||||| || || |||| || || || || Sbjct 356386 TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGC 356327 Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444 || |||||| | |||||||| || || | || |||||||| |||| |||||| || Sbjct 356326 GCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTG 356267 Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 ||||||||| |||||||||||||| | || || ||| ||||| ||||| ||||| Sbjct 356266 CCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTA 356207 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 ||||| |||||||| ||||||| ||| || |||| ||||| || | |||||||| Sbjct 356206 ACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGT 356147 Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 ||| ||||| || || || || || ||| | |||| ||||||||||| || Sbjct 356146 ACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGC 356087 Query 66625 CGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACC 66684 | |||| || || |||||| | || | | || || |||||| ||| | Sbjct 356086 CATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTCCTC 356027 Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744 ||| || | ||| ||||||| ||| || || | || || |||| ||| | Sbjct 356026 CTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAA 355967 Query 66745 GGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGC 66804 ||||| | || || || ||| | | || |||||| ||||| ||||| | |||| Sbjct 355966 AGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACG 355907 Query 66805 ATCAAT 66810 ||||| Sbjct 355906 CTCAAT 355901 >seq193 Length=35663 Score = 172 bits (190), Expect = 4e-38 Identities = 562/860 (65%), Gaps = 30/860 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| | Sbjct 4658 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 4599 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | || ||| | ||||| Sbjct 4598 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 4539 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| ||||||||||||||| | | || || Sbjct 4538 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 4479 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||| || |||||||| || Sbjct 4478 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 4420 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| || | ||| | ||||||||||| ||||||| ||| | || Sbjct 4419 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 4360 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | ||| | | ||||| ||| | || || || || || | | |||| | Sbjct 4359 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 4304 Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 ||||||||||| || ||||| || | | ||| |||| || | | | || | | Sbjct 4303 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTCGCTCAGCGTCTTGTT 4245 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| | Sbjct 4244 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 4185 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| ||||||| ||| || ||| | || || || || ||| Sbjct 4184 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 4125 Query 61618 GGCATGCATTGTGATTTTG-CTGT-TTTGCTATTCAAACGCTATCTGGTGAATCGTCCG- 61674 || | || || |||| |||| | | | || || || | || | | | Sbjct 4124 GGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCAC---CTCAAGGGACGTGCCAGC 4068 Query 61675 --TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | | || ||| | || || || |||| || ||||| |||| Sbjct 4067 AAACAGATGATCCAG-----GACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 4013 Query 61733 TGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 | ||||| ||| | ||| | | | || |||||||||| | || ||| |||||| Sbjct 4012 TTACTGAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 3954 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 || ||||| || || || ||||| | || | | | || | || | | || || | Sbjct 3953 ATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGGCAACGAGAAGGTGTACAAGTCC 3894 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | ||||| || || |||||||| | || || || | |||||||| || || |||||| Sbjct 3893 ACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAG 3834 Query 61912 AAACGTGTAGGCGACTATCA 61931 || || || | ||||| || Sbjct 3833 AAGCGCGTTGCTGACTACCA 3814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563789382160