Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq109 297 2e-75
seq193 172 4e-38
>seq109
Length=515286
Score = 297 bits (328), Expect = 2e-75
Identities = 1128/1746 (65%), Gaps = 42/1746 (2%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| ||||||||||| | |||||| |||| || | || ||||||||||| ||
Sbjct 357616 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 357557
Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194
|||||| || ||| ||| || ||| ||||| | || | || |||| | | ||
Sbjct 357556 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 357499
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || || | |||||| |||||| ||| | |||||| || ||||||
Sbjct 357498 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 357439
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313
|| | | | | || || |||||||| || ||||||||||| | | | | |||
Sbjct 357438 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 357380
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373
|| || | |||| ||||| ||||| | ||||| ||||| || |||
Sbjct 357379 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 357320
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431
| || ||||| | ||||| |||| ||||| |||| ||| | | |||| ||
Sbjct 357319 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 357262
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
||||||||||| | || || || || ||||||||||| ||| || |||||| ||
Sbjct 357261 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 357202
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
|| ||||||| ||||| || | ||| || || ||||| ||||| || | || |
Sbjct 357201 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 357142
Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611
|| || | |||| | | | | | || | ||||||| ||| | |||
Sbjct 357141 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 357084
Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669
| | ||||| | ||||| || || || | || | ||| || || |
Sbjct 357083 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 357030
Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728
| ||| | ||| || ||||||||||| ||||| |||| | | || ||
Sbjct 357029 CCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAGACGTAGTA-AGGGCA 356971
Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788
|| || ||||||||||| || | || || ||||| |||||| ||| |
Sbjct 356970 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 356911
Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848
||||| | | | ||| | || || |||||||| || |||| ||| ||||| ||
Sbjct 356910 GGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGG 356851
Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908
||||||| ||| | ||||| | |||||||||| |||| ||||| ||
Sbjct 356850 TGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTG 356791
Query 65909 TTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTT 65967
||||||||||| || || || || ||| ||| | | ||| || |
Sbjct 356790 TTCAAATTGCGGACAACAACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG-------T 356739
Query 65968 AGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG-CAAGAGATGCGAGGTTG 66025
|| | | ||| | | | | ||| ||| || | |||| || || ||||||
Sbjct 356738 AGCAAGCATCTTCATAGTTG------ATAAAAGAGGGCAGAGACAAG-GAGGCAAGGTTG 356686
Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085
|| ||||| | ||| ||||| ||| || || | || || |||||||| || ||
Sbjct 356685 CAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAGCTT 356626
Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145
|| ||||| || | |||| ||| ||||||||||||||||| ||||||||| | ||||
Sbjct 356625 CGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGCATG 356566
Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205
| || | |||||||| |||| ||||| ||||||| |||||| | |||||
Sbjct 356565 AAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTG 356506
Query 66206 ACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264
| | || | | |||| ||| | | ||||| | |||||| || || || ||
Sbjct 356505 ATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTC 356447
Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324
||| | || | || | || || | || || ||||| || | ||| || || |
Sbjct 356446 ACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTT 356387
Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384
|| ||||| ||| || |||||||| ||||| || || |||| || || || ||
Sbjct 356386 TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGC 356327
Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444
|| |||||| | |||||||| || || | || |||||||| |||| |||||| ||
Sbjct 356326 GCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTG 356267
Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504
||||||||| |||||||||||||| | || || ||| ||||| ||||| |||||
Sbjct 356266 CCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTA 356207
Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564
||||| |||||||| ||||||| ||| || |||| ||||| || | ||||||||
Sbjct 356206 ACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGT 356147
Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624
||| ||||| || || || || || ||| | |||| ||||||||||| ||
Sbjct 356146 ACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGC 356087
Query 66625 CGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACC 66684
| |||| || || |||||| | || | | || || |||||| ||| |
Sbjct 356086 CATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTCCTC 356027
Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744
||| || | ||| ||||||| ||| || || | || || |||| ||| |
Sbjct 356026 CTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAA 355967
Query 66745 GGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGC 66804
||||| | || || || ||| | | || |||||| ||||| ||||| | ||||
Sbjct 355966 AGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACG 355907
Query 66805 ATCAAT 66810
|||||
Sbjct 355906 CTCAAT 355901
>seq193
Length=35663
Score = 172 bits (190), Expect = 4e-38
Identities = 562/860 (65%), Gaps = 30/860 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| |
Sbjct 4658 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 4599
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || || | | || ||| | |||||
Sbjct 4598 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 4539
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| ||||||||||||||| | | || ||
Sbjct 4538 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 4479
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||| || |||||||| ||
Sbjct 4478 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 4420
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| || | ||| | ||||||||||| ||||||| ||| | ||
Sbjct 4419 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 4360
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438
| ||| | | ||||| ||| | || || || || || | | |||| |
Sbjct 4359 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 4304
Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497
||||||||||| || ||||| || | | ||| |||| || | | | || | |
Sbjct 4303 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTCGCTCAGCGTCTTGTT 4245
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| |
Sbjct 4244 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 4185
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||| ||||||| ||| || ||| | || || || || |||
Sbjct 4184 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 4125
Query 61618 GGCATGCATTGTGATTTTG-CTGT-TTTGCTATTCAAACGCTATCTGGTGAATCGTCCG- 61674
|| | || || |||| |||| | | | || || || | || | | |
Sbjct 4124 GGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCAC---CTCAAGGGACGTGCCAGC 4068
Query 61675 --TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || || | | || ||| | || || || |||| || ||||| ||||
Sbjct 4067 AAACAGATGATCCAG-----GACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 4013
Query 61733 TGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
| ||||| ||| | ||| | | | || |||||||||| | || ||| ||||||
Sbjct 4012 TTACTGAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 3954
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
|| ||||| || || || ||||| | || | | | || | || | | || || |
Sbjct 3953 ATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGGCAACGAGAAGGTGTACAAGTCC 3894
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
| ||||| || || |||||||| | || || || | |||||||| || || ||||||
Sbjct 3893 ACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAG 3834
Query 61912 AAACGTGTAGGCGACTATCA 61931
|| || || | ||||| ||
Sbjct 3833 AAGCGCGTTGCTGACTACCA 3814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563789382160
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