Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq222 93.3 2e-13 seq666 86.0 2e-11 >seq222 Length=76862 Score = 93.3 bits (102), Expect = 2e-13 Identities = 210/313 (67%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793 |||||||| ||| || ||||| || | | ||| || |||||||| | |||||||||| Sbjct 19918 ACATCGTAGTAGATGACGTTCATACCCATAGCCTCAGCGAGGACAGACAGCTGAGAACCA 19859 Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAA 12853 |||| ||| || || || || || | ||||| |||| || || | || || | ||| Sbjct 19858 ATGTGACCGTAGCCGACAATTCCCAAAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGCT 19800 Query 12854 G-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAG 12912 | ||||||||| | || |||| | || ||| || || || | ||||| | ||| Sbjct 19799 GACCTTGTTCCAGGTACCACGGTGCATCTCGTTGGATCGGTCGCCGAGTTGACGGGCAAG 19740 Query 12913 ATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATT 12972 | || | | | |||| ||||| || || || | | |||| ||||| || || Sbjct 19739 GGTGATGATCTCGGCAATGACAAGCTCAGCGACACTGCGCGAGTTGGCGAAGGGGGAGTT 19680 Query 12973 AAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCA 13032 ||||| || || || |||| || | || || | ||||| | | |||||| || Sbjct 19679 GAAGACGGCGATACCATTCTTGGCGGCAAACTCGAGGTCGACCTGGTTGGTACCAATACA 19620 Query 13033 GAAGCATCCTATG 13045 |||||| || ||| Sbjct 19619 GAAGCAGCCGATG 19607 >seq666 Length=450310 Score = 86.0 bits (94), Expect = 2e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||| | | ||||||||||||| |||||||| || || | Sbjct 211534 CAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGATAATGTCAGGAGTCAGACCCT 211475 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | | | || |||||||| || | || | | | ||| || || |||||||| | | Sbjct 211474 CTCTGCTGAAAGGCATATCCTCCTGTCGATAGGTAACACCGATTGTACCCTTTTGACCGT 211415 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 ||||| || |||||||| ||||| Sbjct 211414 GACGAGAGGCGAACTTGTCACCAAT 211390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884865413557017