Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq389 297 2e-75
seq380 172 4e-38
>seq389
Length=813516
Score = 297 bits (328), Expect = 2e-75
Identities = 1128/1746 (65%), Gaps = 42/1746 (2%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| ||||||||||| | |||||| |||| || | || ||||||||||| ||
Sbjct 462480 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 462421
Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194
|||||| || ||| ||| || ||| ||||| | || | || |||| | | ||
Sbjct 462420 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 462363
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || || | |||||| |||||| ||| | |||||| || ||||||
Sbjct 462362 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 462303
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313
|| | | | | || || |||||||| || ||||||||||| | | | | |||
Sbjct 462302 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 462244
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373
|| || | |||| ||||| ||||| | ||||| ||||| || |||
Sbjct 462243 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 462184
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431
| || ||||| | ||||| |||| ||||| |||| ||| | | |||| ||
Sbjct 462183 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 462126
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
||||||||||| | || || || || ||||||||||| ||| || |||||| ||
Sbjct 462125 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 462066
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
|| ||||||| ||||| || | ||| || || ||||| ||||| || | || |
Sbjct 462065 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 462006
Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611
|| || | |||| | | | | | || | ||||||| ||| | |||
Sbjct 462005 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 461948
Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669
| | ||||| | ||||| || || || | || | ||| || || |
Sbjct 461947 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 461894
Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728
| ||| | ||| || ||||||||||| ||||| |||| | | || ||
Sbjct 461893 CCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAGACGTAGTA-AGGGCA 461835
Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788
|| || ||||||||||| || | || || ||||| |||||| ||| |
Sbjct 461834 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 461775
Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848
||||| | | | ||| | || || |||||||| || |||| ||| ||||| ||
Sbjct 461774 GGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGG 461715
Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908
||||||| ||| | ||||| | |||||||||| |||| ||||| ||
Sbjct 461714 TGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTG 461655
Query 65909 TTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTT 65967
||||||||||| || || || || ||| ||| | | ||| || |
Sbjct 461654 TTCAAATTGCGGACAACAACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG-------T 461603
Query 65968 AGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG-CAAGAGATGCGAGGTTG 66025
|| | | ||| | | | | ||| ||| || | |||| || || ||||||
Sbjct 461602 AGCAAGCATCTTCATAGTTG------ATAAAAGAGGGCAGAGACAAG-GAGGCAAGGTTG 461550
Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085
|| ||||| | ||| ||||| ||| || || | || || |||||||| || ||
Sbjct 461549 CAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAGCTT 461490
Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145
|| ||||| || | |||| ||| ||||||||||||||||| ||||||||| | ||||
Sbjct 461489 CGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGCATG 461430
Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205
| || | |||||||| |||| ||||| ||||||| |||||| | |||||
Sbjct 461429 AAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTG 461370
Query 66206 ACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264
| | || | | |||| ||| | | ||||| | |||||| || || || ||
Sbjct 461369 ATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTC 461311
Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324
||| | || | || | || || | || || ||||| || | ||| || || |
Sbjct 461310 ACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTT 461251
Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384
|| ||||| ||| || |||||||| ||||| || || |||| || || || ||
Sbjct 461250 TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGC 461191
Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444
|| |||||| | |||||||| || || | || |||||||| |||| |||||| ||
Sbjct 461190 GCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTG 461131
Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504
||||||||| |||||||||||||| | || || ||| ||||| ||||| |||||
Sbjct 461130 CCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTA 461071
Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564
||||| |||||||| ||||||| ||| || |||| ||||| || | ||||||||
Sbjct 461070 ACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGT 461011
Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624
||| ||||| || || || || || ||| | |||| ||||||||||| ||
Sbjct 461010 ACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGC 460951
Query 66625 CGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACC 66684
| |||| || || |||||| | || | | || || |||||| ||| |
Sbjct 460950 CATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTCCTC 460891
Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744
||| || | ||| ||||||| ||| || || | || || |||| ||| |
Sbjct 460890 CTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAA 460831
Query 66745 GGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGC 66804
||||| | || || || ||| | | || |||||| ||||| ||||| | ||||
Sbjct 460830 AGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACG 460771
Query 66805 ATCAAT 66810
|||||
Sbjct 460770 CTCAAT 460765
>seq380
Length=646993
Score = 172 bits (190), Expect = 4e-38
Identities = 562/860 (65%), Gaps = 30/860 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| |
Sbjct 392764 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 392705
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || || | | || ||| | |||||
Sbjct 392704 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 392645
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| ||||||||||||||| | | || ||
Sbjct 392644 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 392585
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||| || |||||||| ||
Sbjct 392584 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 392526
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| || | ||| | ||||||||||| ||||||| ||| | ||
Sbjct 392525 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 392466
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438
| ||| | | ||||| ||| | || || || || || | | |||| |
Sbjct 392465 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 392410
Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497
||||||||||| || ||||| || | | ||| |||| || | | | || | |
Sbjct 392409 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTCGCTCAGCGTCTTGTT 392351
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| |
Sbjct 392350 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 392291
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||| ||||||| ||| || ||| | || || || || |||
Sbjct 392290 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 392231
Query 61618 GGCATGCATTGTGATTTTG-CTGT-TTTGCTATTCAAACGCTATCTGGTGAATCGTCCG- 61674
|| | || || |||| |||| | | | || || || | || | | |
Sbjct 392230 GGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCAC---CTCAAGGGACGTGCCAGC 392174
Query 61675 --TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || || | | || ||| | || || || |||| || ||||| ||||
Sbjct 392173 AAACAGATGATCCAG-----GACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 392119
Query 61733 TGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
| ||||| ||| | ||| | | | || |||||||||| | || ||| ||||||
Sbjct 392118 TTACTGAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 392060
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
|| ||||| || || || ||||| | || | | | || | || | | || || |
Sbjct 392059 ATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGGCAACGAGAAGGTGTACAAGTCC 392000
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
| ||||| || || |||||||| | || || || | |||||||| || || ||||||
Sbjct 391999 ACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAG 391940
Query 61912 AAACGTGTAGGCGACTATCA 61931
|| || || | ||||| ||
Sbjct 391939 AAGCGCGTTGCTGACTACCA 391920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565645155040
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