Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717905.1_202016-08-31] 303 sequences; 36,666,367 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq20 753 0.0 seq199 107 6e-21 >seq20 Length=7655 Score = 753 bits (834), Expect = 0.0 Identities = 470/504 (93%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3478 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 3537 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3538 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 3597 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 3598 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 3657 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| || || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 3658 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 3717 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||| Sbjct 3718 CAAGGCCATGCGATTCGAGGAGTTATCATGAATCACCAGTGAGCCCCGGAGGGCATTGGT 3777 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 3778 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 3837 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct 3838 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 3897 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 3898 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 3956 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 3957 AGACAAGCATATGACTACTGGCAG 3980 >seq199 Length=605641 Score = 107 bits (118), Expect = 6e-21 Identities = 119/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 ||| ||| ||||| ||| ||||| ||| ||| ||| ||||| | |||| ||| | Sbjct 581230 CTGACTTTCTTGGTTGTAGTAGCAGTTATCCAG-CTCATTCTCCCGGGTCGAGCCCCGAC 581172 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 | || |||||||||| |||||| | ||||| ||| | | | |||||||||||||||| Sbjct 581171 CCTCCTTTACCCGTTGCAACCATGTTTGGCCAGTATTCAAACGTCGAAAGTTGATAGGG- 581113 Query 214 AGAAATTTGAATGAACCATCGCCGGCTCAAGGCCAT 249 ||||||| ||||||||||| |||| | ||||| || Sbjct 581112 AGAAATTAGAATGAACCATTGCCGACATAAGGCTAT 581077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510395423488