Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq446 237 3e-60
seq165 167 4e-39
>seq446
Length=7734
Score = 237 bits (262), Expect = 3e-60
Identities = 226/282 (80%), Gaps = 14/282 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 494 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 437
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 436 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 377
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | ||| ||| | |||||||| ||||| |
Sbjct 376 GAACGCGGTGATAC-CACCCGCACGT-ATAGATGGACAAGAATAGGCCTCGGCTTAGCGT 319
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||||||||| | | |||| || |||||||| | | | | | ||| ||
Sbjct 318 CTTAGCAGGCGATTCCTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 265
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 264 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 223
>seq165
Length=104447
Score = 167 bits (184), Expect = 4e-39
Identities = 154/190 (81%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| ||||||||||| || |||||| ||||||||| |||| || ||||||| ||||||
Sbjct 86589 GTACAAGAGGAACCGCTGA-TTCAGA-TAATTGGTTGCTGCGTCTATCTGACCGGGCAGT 86532
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||| ||||| ||| ||||||||||||||| |||| |||||||||||||
Sbjct 86531 GCCGCGAAGCTACCACCTGCTTGATAATGGCTGAACGCCTCCAAGTTAGAATCCATGCCA 86472
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||| | |||||| | | ||||||| | || || | ||||||| ||||| |
Sbjct 86471 GAATGCGGTGATAC-CACCTGCAC-GCACAGATAGACAAAAATAGGCCTCGGCTTAGCGT 86414
Query 181 CTTAGCAGGC 190
||||||||||
Sbjct 86413 CTTAGCAGGC 86404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819195873280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |