Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F001717915.1_202016-08-31]
520 sequences; 36,350,275 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq393 297 2e-75
seq118 172 4e-38
>seq393
Length=304890
Score = 297 bits (328), Expect = 2e-75
Identities = 1128/1746 (65%), Gaps = 42/1746 (2%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| ||||||||||| | |||||| |||| || | || ||||||||||| ||
Sbjct 9349 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 9290
Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194
|||||| || ||| ||| || ||| ||||| | || | || |||| | | ||
Sbjct 9289 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 9232
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || || | |||||| |||||| ||| | |||||| || ||||||
Sbjct 9231 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 9172
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313
|| | | | | || || |||||||| || ||||||||||| | | | | |||
Sbjct 9171 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 9113
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373
|| || | |||| ||||| ||||| | ||||| ||||| || |||
Sbjct 9112 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 9053
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431
| || ||||| | ||||| |||| ||||| |||| ||| | | |||| ||
Sbjct 9052 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 8995
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
||||||||||| | || || || || ||||||||||| ||| || |||||| ||
Sbjct 8994 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 8935
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
|| ||||||| ||||| || | ||| || || ||||| ||||| || | || |
Sbjct 8934 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 8875
Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611
|| || | |||| | | | | | || | ||||||| ||| | |||
Sbjct 8874 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 8817
Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669
| | ||||| | ||||| || || || | || | ||| || || |
Sbjct 8816 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 8763
Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728
| ||| | ||| || ||||||||||| ||||| |||| | | || ||
Sbjct 8762 CCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAGACGTAGTA-AGGGCA 8704
Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788
|| || ||||||||||| || | || || ||||| |||||| ||| |
Sbjct 8703 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 8644
Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848
||||| | | | ||| | || || |||||||| || |||| ||| ||||| ||
Sbjct 8643 GGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGG 8584
Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908
||||||| ||| | ||||| | |||||||||| |||| ||||| ||
Sbjct 8583 TGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTG 8524
Query 65909 TTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTT 65967
||||||||||| || || || || ||| ||| | | ||| || |
Sbjct 8523 TTCAAATTGCGGACAACAACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG-------T 8472
Query 65968 AGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG-CAAGAGATGCGAGGTTG 66025
|| | | ||| | | | | ||| ||| || | |||| || || ||||||
Sbjct 8471 AGCAAGCATCTTCATAGTTG------ATAAAAGAGGGCAGAGACAAG-GAGGCAAGGTTG 8419
Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085
|| ||||| | ||| ||||| ||| || || | || || |||||||| || ||
Sbjct 8418 CAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAGCTT 8359
Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145
|| ||||| || | |||| ||| ||||||||||||||||| ||||||||| | ||||
Sbjct 8358 CGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGCATG 8299
Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205
| || | |||||||| |||| ||||| ||||||| |||||| | |||||
Sbjct 8298 AAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTG 8239
Query 66206 ACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264
| | || | | |||| ||| | | ||||| | |||||| || || || ||
Sbjct 8238 ATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTC 8180
Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324
||| | || | || | || || | || || ||||| || | ||| || || |
Sbjct 8179 ACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTT 8120
Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384
|| ||||| ||| || |||||||| ||||| || || |||| || || || ||
Sbjct 8119 TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGC 8060
Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444
|| |||||| | |||||||| || || | || |||||||| |||| |||||| ||
Sbjct 8059 GCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTG 8000
Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504
||||||||| |||||||||||||| | || || ||| ||||| ||||| |||||
Sbjct 7999 CCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTA 7940
Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564
||||| |||||||| ||||||| ||| || |||| ||||| || | ||||||||
Sbjct 7939 ACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGT 7880
Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624
||| ||||| || || || || || ||| | |||| ||||||||||| ||
Sbjct 7879 ACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGC 7820
Query 66625 CGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACC 66684
| |||| || || |||||| | || | | || || |||||| ||| |
Sbjct 7819 CATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTCCTC 7760
Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744
||| || | ||| ||||||| ||| || || | || || |||| ||| |
Sbjct 7759 CTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAA 7700
Query 66745 GGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGC 66804
||||| | || || || ||| | | || |||||| ||||| ||||| | ||||
Sbjct 7699 AGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACG 7640
Query 66805 ATCAAT 66810
|||||
Sbjct 7639 CTCAAT 7634
>seq118
Length=243722
Score = 172 bits (190), Expect = 4e-38
Identities = 562/860 (65%), Gaps = 30/860 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| |
Sbjct 112319 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 112260
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || || | | || ||| | |||||
Sbjct 112259 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 112200
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| ||||||||||||||| | | || ||
Sbjct 112199 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 112140
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||| || |||||||| ||
Sbjct 112139 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 112081
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| || | ||| | ||||||||||| ||||||| ||| | ||
Sbjct 112080 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 112021
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438
| ||| | | ||||| ||| | || || || || || | | |||| |
Sbjct 112020 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 111965
Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497
||||||||||| || ||||| || | | ||| |||| || | | | || | |
Sbjct 111964 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTCGCTCAGCGTCTTGTT 111906
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| |
Sbjct 111905 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 111846
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||| ||||||| ||| || ||| | || || || || |||
Sbjct 111845 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 111786
Query 61618 GGCATGCATTGTGATTTTG-CTGT-TTTGCTATTCAAACGCTATCTGGTGAATCGTCCG- 61674
|| | || || |||| |||| | | | || || || | || | | |
Sbjct 111785 GGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCAC---CTCAAGGGACGTGCCAGC 111729
Query 61675 --TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || || | | || ||| | || || || |||| || ||||| ||||
Sbjct 111728 AAACAGATGATCCAG-----GACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 111674
Query 61733 TGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
| ||||| ||| | ||| | | | || |||||||||| | || ||| ||||||
Sbjct 111673 TTACTGAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 111615
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
|| ||||| || || || ||||| | || | | | || | || | | || || |
Sbjct 111614 ATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGGCAACGAGAAGGTGTACAAGTCC 111555
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
| ||||| || || |||||||| | || || || | |||||||| || || ||||||
Sbjct 111554 ACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAG 111495
Query 61912 AAACGTGTAGGCGACTATCA 61931
|| || || | ||||| ||
Sbjct 111494 AAGCGCGTTGCTGACTACCA 111475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565480412800
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