Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F900044135.1_202016-08-03] 6 sequences; 38,047,942 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 297 2e-75 >seq3 Length=7792947 Score = 297 bits (328), Expect = 2e-75 Identities = 1128/1746 (65%), Gaps = 42/1746 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | |||||| |||| || | || ||||||||||| || Sbjct 1388223 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 1388164 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| || ||| ||||| | || | || |||| | | || Sbjct 1388163 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 1388106 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| |||||| ||| | |||||| || |||||| Sbjct 1388105 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 1388046 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | | | || || |||||||| || ||||||||||| | | | | ||| Sbjct 1388045 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 1387987 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | |||| ||||| ||||| | ||||| ||||| || ||| Sbjct 1387986 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 1387927 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||| | ||||| |||| ||||| |||| ||| | | |||| || Sbjct 1387926 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 1387869 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | || || || || ||||||||||| ||| || |||||| || Sbjct 1387868 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 1387809 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | ||| || || ||||| ||||| || | || | Sbjct 1387808 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 1387749 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | |||| | | | | | || | ||||||| ||| | ||| Sbjct 1387748 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 1387691 Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 | | ||||| | ||||| || || || | || | ||| || || | Sbjct 1387690 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 1387637 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728 | ||| | ||| || ||||||||||| ||||| |||| | | || || Sbjct 1387636 CCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAGACGTAGTA-AGGGCA 1387578 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || || ||||||||||| || | || || ||||| |||||| ||| | Sbjct 1387577 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 1387518 Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 ||||| | | | ||| | || || |||||||| || |||| ||| ||||| || Sbjct 1387517 GGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGG 1387458 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 ||||||| ||| | ||||| | |||||||||| |||| ||||| || Sbjct 1387457 TGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTG 1387398 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTT 65967 ||||||||||| || || || || ||| ||| | | ||| || | Sbjct 1387397 TTCAAATTGCGGACAACAACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG-------T 1387346 Query 65968 AGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG-CAAGAGATGCGAGGTTG 66025 || | | ||| | | | | ||| ||| || | |||| || || |||||| Sbjct 1387345 AGCAAGCATCTTCATAGTTG------ATAAAAGAGGGCAGAGACAAG-GAGGCAAGGTTG 1387293 Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085 || ||||| | ||| ||||| ||| || || | || || |||||||| || || Sbjct 1387292 CAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAGCTT 1387233 Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145 || ||||| || | |||| ||| ||||||||||||||||| ||||||||| | |||| Sbjct 1387232 CGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGCATG 1387173 Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205 | || | |||||||| |||| ||||| ||||||| |||||| | ||||| Sbjct 1387172 AAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTG 1387113 Query 66206 ACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 | | || | | |||| ||| | | ||||| | |||||| || || || || Sbjct 1387112 ATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTC 1387054 Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324 ||| | || | || | || || | || || ||||| || | ||| || || | Sbjct 1387053 ACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTT 1386994 Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384 || ||||| ||| || |||||||| ||||| || || |||| || || || || Sbjct 1386993 TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGC 1386934 Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444 || |||||| | |||||||| || || | || |||||||| |||| |||||| || Sbjct 1386933 GCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTG 1386874 Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 ||||||||| |||||||||||||| | || || ||| ||||| ||||| ||||| Sbjct 1386873 CCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTA 1386814 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 ||||| |||||||| ||||||| ||| || |||| ||||| || | |||||||| Sbjct 1386813 ACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGT 1386754 Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 ||| ||||| || || || || || ||| | |||| ||||||||||| || Sbjct 1386753 ACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGC 1386694 Query 66625 CGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACC 66684 | |||| || || |||||| | || | | || || |||||| ||| | Sbjct 1386693 CATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTCCTC 1386634 Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744 ||| || | ||| ||||||| ||| || || | || || |||| ||| | Sbjct 1386633 CTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAA 1386574 Query 66745 GGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGC 66804 ||||| | || || || ||| | | || |||||| ||||| ||||| | |||| Sbjct 1386573 AGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACG 1386514 Query 66805 ATCAAT 66810 ||||| Sbjct 1386513 CTCAAT 1386508 Score = 172 bits (190), Expect = 4e-38 Identities = 562/860 (65%), Gaps = 30/860 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| | Sbjct 2176301 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 2176242 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | || ||| | ||||| Sbjct 2176241 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 2176182 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| ||||||||||||||| | | || || Sbjct 2176181 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 2176122 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||| || |||||||| || Sbjct 2176121 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 2176063 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| || | ||| | ||||||||||| ||||||| ||| | || Sbjct 2176062 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 2176003 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | ||| | | ||||| ||| | || || || || || | | |||| | Sbjct 2176002 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 2175947 Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 ||||||||||| || ||||| || | | ||| |||| || | | | || | | Sbjct 2175946 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTCGCTCAGCGTCTTGTT 2175888 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| | Sbjct 2175887 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 2175828 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| ||||||| ||| || ||| | || || || || ||| Sbjct 2175827 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 2175768 Query 61618 GGCATGCATTGTGATTTTG-CTGT-TTTGCTATTCAAACGCTATCTGGTGAATCGTCCG- 61674 || | || || |||| |||| | | | || || || | || | | | Sbjct 2175767 GGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCAC---CTCAAGGGACGTGCCAGC 2175711 Query 61675 --TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | | || ||| | || || || |||| || ||||| |||| Sbjct 2175710 AAACAGATGATCCAG-----GACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 2175656 Query 61733 TGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 | ||||| ||| | ||| | | | || |||||||||| | || ||| |||||| Sbjct 2175655 TTACTGAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 2175597 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 || ||||| || || || ||||| | || | | | || | || | | || || | Sbjct 2175596 ATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGGCAACGAGAAGGTGTACAAGTCC 2175537 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | ||||| || || |||||||| | || || || | |||||||| || || |||||| Sbjct 2175536 ACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAG 2175477 Query 61912 AAACGTGTAGGCGACTATCA 61931 || || || | ||||| || Sbjct 2175476 AAGCGCGTTGCTGACTACCA 2175457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567970927840