Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2469 100 1e-15 >seq2469 Length=167591 Score = 100 bits (110), Expect = 1e-15 Identities = 212/314 (68%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| ||| || ||||| || | | ||| || ||||| || | ||||||||| Sbjct 52081 AACATCGTAGTAGATGACGTTCATACCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 52140 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || ||||| || ||||| |||| || || | || || | | | Sbjct 52141 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGCGC 52199 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| |||| |||| | || ||| || || || | |||||| | || Sbjct 52200 TGACCTTGTTCCAGGTGCCACGGTGCATCTCGTTGGATCGGTCGCCGAGCTGACGGGCAA 52259 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 | | || | | | |||| ||||| || || || | | |||| ||||| || | Sbjct 52260 GGGTGATGATCTCGGCGATGACAAGCTCAGCGACACTGCGCGAGTTGGCGAAGGGGGAGT 52319 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031 | ||||| || || || |||| || | || || | ||||| | | ||| || | Sbjct 52320 TGAAGACAGCGATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTACCGATAC 52379 Query 13032 AGAAGCATCCTATG 13045 ||||||| || ||| Sbjct 52380 AGAAGCAGCCGATG 52393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884796440851425