Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3012 342 4e-89 seq2855 215 4e-51 >seq3012 Length=424931 Score = 342 bits (378), Expect = 4e-89 Identities = 1221/1876 (65%), Gaps = 42/1876 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| |||||||||||||| Sbjct 42356 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGT 42415 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| ||| ||| || | ||| ||||| || | || |||| | | || Sbjct 42416 CTTGAGACCAAGCTTCCA-GCCTGCAAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGG 42473 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| || || || ||| Sbjct 42474 TCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGGTCAGCGGCC 42533 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | || || | || || |||||||| || ||||| ||||| | | | || || Sbjct 42534 ATCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGA-GCCTTGACATC 42592 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 42593 GGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCAT 42652 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 42653 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 42710 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||||||||| ||| ||| || ||| | Sbjct 42711 TGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 42770 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | ||| ||||| ||||| ||||| | | || | Sbjct 42771 TCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 42830 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | | | | || | | || ||||||| ||| | | | Sbjct 42831 TTACGGATACCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTC 42886 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | ||| |||||| || || ||| | || | ||| || || || Sbjct 42887 AGAG--GGCTTG-ACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCC 42943 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 ||| | ||| |||||||||||||| || || | || ||| || || Sbjct 42944 CTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACGGAGGCAGTGAGGGCAGC 43003 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 || ||||||||||| || | || || ||||| ||||| |||| | || Sbjct 43004 GTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGG 43063 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||| | || | |||| || || || || ||||| || | ||| ||||| || || Sbjct 43064 CATGCGCAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTG 43123 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 |||| ||| | ||||| || |||||||||| || | ||||| || || Sbjct 43124 GCGCATGTTGCTGTTGCGAGCCTCCGGGACAGGGTAGTGGTTCACGTCGATGATCTTGTT 43183 Query 65911 CAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAG 65969 || ||||| | || || || || ||| |||| | | ||| || | || Sbjct 43184 CAGGTTGCGAATAACAACCTGACTGACCTCGT-GCAACTTCTTGAAGTCGTAGC----AG 43238 Query 65970 GACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 | | |||| ||| || | || || || || ||||| || ||||||||| Sbjct 43239 GCCTCATCGT-AGTTGATGA----AGGAA----GGCAGAGCCAGAGAGGCAAGGTTGCAG 43289 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 ||||| | ||||||||| || |||||||| |||||| |||||||| ||| || || Sbjct 43290 ACAGCGACCTCGTCAGGGGCACAATACTCGATAATTTCAGTGCACAGGTTAGAGCTTCGG 43349 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 |||||||| | |||| ||| || |||||||| ||||| ||||||||||| | |||| | Sbjct 43350 ATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAA 43409 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || | || |||||| || | ||||| ||||| | |||||| | ||||| | Sbjct 43410 GGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAGCTTCTGAGCCTTGATA 43469 Query 66209 GTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || | | | |||| | | | | || || | |||||| || ||||| ||||| Sbjct 43470 GT-CTTGCGACCCTTGCCCTCCTTCTCATACTTTTCGTACAGAGCCTCGAACTCCTCACC 43528 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 | |||| || | || |||| || || |||||||| | ||| ||||| | || Sbjct 43529 GTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTT 43588 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| ||||| |||||| |||||||| ||||| |||||| ||| || || || || || Sbjct 43589 TTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACG 43648 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 |||||| | ||||| || || || | || |||||||| |||| || | ||||| Sbjct 43649 GACCTCCTCTTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGAGTGCCA 43708 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 || || ||||||||||| || | || || ||| |||||| || ||||| ||||| Sbjct 43709 AGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGATCGACATAGCG 43768 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| |||||||||||||| | ||| || || | ||||| ||| | || ||||| || Sbjct 43769 AGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACC 43828 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||||| ||| || || || ||| ||| || |||||||||||||| || ||| | Sbjct 43829 GGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCAGACCAATACCTCCAGCCAT 43888 Query 66628 CTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685 ||| ||||| ||||| || | | | || | | ||||| ||||| ||| || Sbjct 43889 CTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATGCCCTCAATACTGTCGTCC 43946 Query 66686 TTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745 || || | | | |||| || | |||||| | || || | || |||||| Sbjct 43947 TTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGT 44006 Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCA 66805 ||||| | || || |||||| | | || ||||| || || ||||| | ||| Sbjct 44007 GTGGGAGAGGCATGTGTAAAGAATTTGCTGGACATCAGGTTATATGTCTCCAAGACTCGC 44066 Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 || || | || || || || | | |||| ||||| | | || ||||| || || Sbjct 44067 TCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGGGCGCTC 44125 Query 66865 GACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 ||| | | | | | || | | | |||||| || |||| ||||||| |||||||| Sbjct 44126 GACAATCTTACCGTCAATCTTGAGGAGGTAGGATCGCTCCAAAGTCTTGAAGCCAAAGTA 44185 Query 66925 CGAGTAATTGAAATCG 66940 ||| | ||||||| Sbjct 44186 TTGGTATTGGAAATCG 44201 >seq2855 Length=139020 Score = 215 bits (238), Expect = 4e-51 Identities = 567/856 (66%), Gaps = 22/856 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 126371 ATCTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCCGAGGAGATTGATCTC 126312 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || ||| || ||| | Sbjct 126311 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 126252 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||| ||||| ||||| | | || || Sbjct 126251 CACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTTGAGCGA 126192 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||||||||||||||||||||| ||| Sbjct 126191 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATG 126132 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||| |||| ||| ||||||| || || ||||||| ||||| || Sbjct 126131 GAGAACATCCACTCTGAGACCTACTCCCTTCTCATTGACACCTACATCAAGGAGCCCGCC 126072 Query 61384 GAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | || | | | | ||||| ||||| ||||| || || || | | |||| | Sbjct 126071 CAGCG-AACCTACCTCTTCAACGCCATTGAGACCATTCC----TTGCATCCGAAAGAAGG 126017 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| |||| | || | || | |||| | || | | Sbjct 126016 CCGACTGGGCCATCCGATGGAT--CCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGT 125959 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || || || | || |||||| | || ||||| || | |||||| | ||||| ||| | Sbjct 125958 TGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTTCTGGCT 125899 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || |||||||| ||||||||| ||| ||| | || || || || || Sbjct 125898 CAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGA 125839 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGT 61675 ||| | || ||| ||||| | || || || || | || | |||| | Sbjct 125838 GGGTCTCCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTGCCA 125783 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | || || | ||| || || || || || ||||| || || | Sbjct 125782 GCAAGCAGATGATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTCA 125723 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| ||| | ||| | || |||||||||| | || || ||| ||||||||||| Sbjct 125722 CTGAGGCTCTCCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTATATTG 125663 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || || ||||| ||||| | || | | | || | || | |||| || | | | Sbjct 125662 AGTTCGTCGCCGATCGTCTCCTTGTTGCTCTTGGCAACGAGAAGGTCTACAAGGCTACCA 125603 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || || || | ||||||||| || || |||||||| | Sbjct 125602 ACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGC 125543 Query 61916 GTGTAGGCGACTATCA 61931 |||| | |||||| || Sbjct 125542 GTGTTGCCGACTACCA 125527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550140003040