Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1265 700 0.0
>seq1265
Length=8425
Score = 700 bits (776), Expect = 0.0
Identities = 555/657 (84%), Gaps = 12/657 (2%)
Strand=Plus/Plus
Query 30 CTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCT 89
||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||
Sbjct 841 CTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATGTCTTCT 900
Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 AAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 960
Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209
||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||
Sbjct 961 CACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTATGACCA 1020
Query 210 GACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGC 267
|||||| | ||| ||| | || ||| || ||||||| ||| | || |||||
Sbjct 1021 GACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAGTCCAGGC 1077
Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327
||||||||| | || | |||||||| | |||||||||||| ||| |||||| ||||
Sbjct 1078 CAGCATCAGTTTTCGCCGGGGGATAAAGACTTCGGGAATGTGGCTCCCCTCGGGGAGTGT 1137
Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387
||||||||| ||| ||| | | || |||||||||| |||||| | || ||||||||
Sbjct 1138 TATAGCCCGTTGTGTAATAC-CCTGGCGGGGACTGAGGTTCGCGCTTCTGCAAGGATGCT 1196
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC-TATG 446
||||||||||| | | || ||||||||| |||||||||||||||||| | || ||||
Sbjct 1197 GGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTTCGTATG 1255
Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506
|||||||| ||||||||||||| | ||||||||||||||||||| ||||| || |
Sbjct 1256 CGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA----GCT 1311
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566
|| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 1312 TCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATACGGGG 1371
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1372 CCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGAGGAAACTCTGGTG 1431
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||| |||||||||||||||||||| |||| || |||||||
Sbjct 1432 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGCATGGGGGCGA 1488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079965980300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |