Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1265 700 0.0 >seq1265 Length=8425 Score = 700 bits (776), Expect = 0.0 Identities = 555/657 (84%), Gaps = 12/657 (2%) Strand=Plus/Plus Query 30 CTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCT 89 ||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||| Sbjct 841 CTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATGTCTTCT 900 Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 AAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 960 Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209 ||||||| |||||||||||||||| ||||||||||||||||||||||||| || |||| Sbjct 961 CACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTTATGACCA 1020 Query 210 GACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGC 267 |||||| | ||| ||| | || ||| || ||||||| ||| | || ||||| Sbjct 1021 GACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAGTCCAGGC 1077 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 ||||||||| | || | |||||||| | |||||||||||| ||| |||||| |||| Sbjct 1078 CAGCATCAGTTTTCGCCGGGGGATAAAGACTTCGGGAATGTGGCTCCCCTCGGGGAGTGT 1137 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 ||||||||| ||| ||| | | || |||||||||| |||||| | || |||||||| Sbjct 1138 TATAGCCCGTTGTGTAATAC-CCTGGCGGGGACTGAGGTTCGCGCTTCTGCAAGGATGCT 1196 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC-TATG 446 ||||||||||| | | || ||||||||| |||||||||||||||||| | || |||| Sbjct 1197 GGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTTCGTATG 1255 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 |||||||| ||||||||||||| | ||||||||||||||||||| ||||| || | Sbjct 1256 CGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA----GCT 1311 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 || ||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 1312 TCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATACGGGG 1371 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1372 CCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGAGGAAACTCTGGTG 1431 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| |||||||||||||||||||| |||| || ||||||| Sbjct 1432 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGCATGGGGGCGA 1488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079965980300