Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1265 242 6e-62 >seq1265 Length=8425 Score = 242 bits (268), Expect = 6e-62 Identities = 227/282 (80%), Gaps = 14/282 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 3572 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 3629 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3630 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3689 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | | || |||| | ||| ||| | |||||||||||||| | Sbjct 3690 GAACGCGGTGATAC-CACCCGCACGT-ATAGATGGACAAGAATAGGCTTCGGCTTAGCGT 3747 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||||||||| | | |||| || |||||||| | | | | | ||| || Sbjct 3748 CTTAGCAGGCGATTCCTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 3801 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| || | || ||| |||||||||||||||||| Sbjct 3802 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 3843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819187413504