Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq839 269 2e-67
seq700 170 2e-37
>seq839
Length=23613
Score = 269 bits (298), Expect = 2e-67
Identities = 539/795 (68%), Gaps = 3/795 (0%)
Strand=Plus/Minus
Query 66009 CAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGG 66068
|||| || || |||||||| ||||| | ||| ||||||||| ||||| | ||| || |
Sbjct 13361 CAAG-GAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAG 13303
Query 66069 TGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATG 66128
||||||| || || || ||||| || | |||| ||| || |||||||| |||||
Sbjct 13302 TGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGT 13243
Query 66129 CATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCC 66188
||||||||| | |||| | || | || ||||| |||| ||| | ||||| | ||
Sbjct 13242 GATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACC 13183
Query 66189 AAAGAGCGCGTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAG 66247
|||| | ||||| | | || | | |||| ||| | | ||||| | |||||
Sbjct 13182 AAAGCTTCTGAGCCTTGATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTAC 13124
Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307
|| ||||| ||||| | || | |||| || |||| || || |||||
Sbjct 13123 AGAGCCTCGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATA 13064
Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367
|| | ||| || |||| || || ||||| ||| || |||||||| ||||| |||||
Sbjct 13063 AGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCC 13004
Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427
||| || || || || || |||||| | ||||| || || || | || ||||||
Sbjct 13003 AGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAC 12944
Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487
|| |||| ||||| ||||| || || |||||||| ||||| | || || ||| |
Sbjct 12943 TCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTTG 12884
Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547
||||| ||||||||||| ||||| |||||||| ||||||| ||| || |||| |||
Sbjct 12883 CCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACCG 12824
Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607
||||| | |||||||| ||| | ||| || || || || || ||| || |||
Sbjct 12823 TTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTTC 12764
Query 66608 AGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATG 66667
| ||||||||||| ||| |||| || || |||||| | || | | ||
Sbjct 12763 AAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATA 12704
Query 66668 CCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGT 66727
||||| ||| ||| |||| || | ||| ||||||| || || || | ||
Sbjct 12703 CCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGG 12644
Query 66728 GTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTG 66787
|| | || ||| || ||||| | ||| || || ||| | | || ||||||| |||
Sbjct 12643 GTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAGGTTG 12584
Query 66788 TACGTCTCGATGACA 66802
|| ||||| | ||||
Sbjct 12583 TATGTCTCCAAGACA 12569
>seq700
Length=246488
Score = 170 bits (188), Expect = 2e-37
Identities = 374/547 (68%), Gaps = 25/547 (5%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || |||||||||||||| | |||||| ||||| |
Sbjct 27434 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 27493
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGT-GAACAACATTTCATTAA 61202
||||| || | |||||||| | ||| || | |||| || || | |||||
Sbjct 27494 TCCAAGGATCTCCATGACTGGAACAACCGTCTAACT-GCGGACGAGCAGTACTTCATCTC 27552
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||||||||| || || ||||| ||||| ||||| | | || ||
Sbjct 27553 CCACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAACCTTGTTGAGCG 27612
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| ||||| || | | ||||| || || |||||||| |||||||| |
Sbjct 27613 ATTCAGCG-GCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGTTTCCAGATCATGA 27671
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| ||||||| || | ||| | | ||||| || || ||||||| ||||| |
Sbjct 27672 TGGAGAACATCCACTCCGAAACATACTCTCTGCTCATTGACACCTACATCAAGGAGCCTG 27731
Query 61382 CGGAACGTGAAC--GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437
| | | |||| | ||||| ||| | || || || || || | | ||||
Sbjct 27732 CTCA--GAGAACTTACCTCTTCAACGCCGTTGACACCATTCC----TTGCATCCGAAAGA 27785
Query 61438 --GCGGATTGGGC-CTTCAATTGGATCACCAGTACA--ACGGCTACATTTGGTGAACGAT 61492
|| |||||||| ||| | ||||| |||| ||| | || | |||| | ||
Sbjct 27786 AGGCTGATTGGGCTATTCGA-TGGAT--CCAGGACAAGAACTCTTCCTTTGCCCAGCGTC 27842
Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552
| | || ||||| | || |||||| | || ||||| || | ||||| | || || |
Sbjct 27843 TTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCT 27902
Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612
|| | ||||| ||||| || |||||||||||||| ||| || ||| | || || || |
Sbjct 27903 GGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTG 27962
Query 61613 ACGAGGG 61619
|||||||
Sbjct 27963 ACGAGGG 27969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397560315259040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |