Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq180 286 3e-72
seq119 170 2e-37
>seq180
Length=606450
Score = 286 bits (316), Expect = 3e-72
Identities = 1128/1749 (64%), Gaps = 48/1749 (3%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| ||||||||||| | |||||| |||| || | || ||||||||||| ||
Sbjct 291571 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 291512
Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194
|||||| || ||| ||| || ||| ||||| | || | || |||| | | ||
Sbjct 291511 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 291454
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || || | |||||| |||||| ||| | |||||| || ||||||
Sbjct 291453 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 291394
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313
|| | | | | || || |||||||| || ||||||||||| | | | | |||
Sbjct 291393 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 291335
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373
|| || | |||| ||||| ||||| | ||||| ||||| || |||
Sbjct 291334 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 291275
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431
| || ||||| | ||||| |||| ||||| |||| ||| | | |||| ||
Sbjct 291274 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 291217
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
||||||||||| | || || || || ||||||||||| ||| || |||||| ||
Sbjct 291216 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 291157
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
|| ||||||| ||||| || | |||| || || ||||| ||||| || | || |
Sbjct 291156 TCGTTGTTGCCAAGAATCTGCGAAGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 291097
Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611
|| || | |||| | | | | | || | ||||||| ||| | |||
Sbjct 291096 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 291039
Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669
| | ||||| | ||||| || || || | || | ||| || || |
Sbjct 291038 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 290985
Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728
| ||| | ||| || |||||||| || ||||| |||| | | || ||
Sbjct 290984 CCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTTGCACAGACGTAGTA-AGGGCA 290926
Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788
|| || ||||||||||| || | || || ||||| |||||| ||| |
Sbjct 290925 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 290866
Query 65789 GGCATACCCATCAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845
||||| | | || ||| | | || || |||||||| || |||| ||| |||||
Sbjct 290865 GGCATGCGGA---GGGCAAGGAAGGCATCAGCAAGACCTTGCACACCAAGACCAATGGGT 290809
Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905
|| ||||||| ||| | ||||| | |||||||||| |||| ||||| ||
Sbjct 290808 CGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATC 290749
Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATG 65964
||||||||||| || || || || ||| ||| | | ||| ||
Sbjct 290748 TTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG----- 290695
Query 65965 TTTAGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG-CAAGAGATGCGAGG 66022
||| | | ||| | | | | || ||| || | |||| || || |||
Sbjct 290694 --TAGCAAGCATCTTCATAGTTG------ATGAAAGAGGGCAGAGACAAG-GAGGCAAGG 290644
Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082
||||| ||||| | ||| ||||| ||| || || | || || |||||||| || |
Sbjct 290643 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 290584
Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142
| || ||||| || | |||| ||| ||||||||||||||||| ||||||||| | |
Sbjct 290583 CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGC 290524
Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202
||| | || | |||||||| |||| ||||| ||||||| |||||| | |||
Sbjct 290523 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCC 290464
Query 66203 TTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261
|| | | || | | |||| ||| | | ||||| | |||||| || || ||
Sbjct 290463 TTGATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTC 290405
Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321
||||| | || | || | || || | || || ||||| || | ||| || ||
Sbjct 290404 GTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCC 290345
Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381
| || ||||| ||| || |||||||| ||||| || || |||| || || ||
Sbjct 290344 GTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACG 290285
Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441
|| || |||||| | |||||||| || || | || |||||||| |||| ||||||
Sbjct 290284 AGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGC 290225
Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501
|||||||| || |||||||||||||| | || || ||| ||||| ||||| ||
Sbjct 290224 GTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAAC 290165
Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561
||| ||||| |||||||| ||||||| ||| || |||| ||||| || | |||||
Sbjct 290164 GTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATT 290105
Query 66562 GGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621
||| ||| ||||| || || || || || ||| | |||| |||||||||||
Sbjct 290104 GGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACC 290045
Query 66622 GGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681
||| |||| || || |||||| | || | | || || |||||| |||
Sbjct 290044 AGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTC 289985
Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741
|||| || | ||| ||||||| ||| || || | || || |||| |||
Sbjct 289984 CTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAA 289925
Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801
| ||||| | || || || ||| | | || |||||| ||||| ||||| | |||
Sbjct 289924 TAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGAC 289865
Query 66802 AGCATCAAT 66810
| |||||
Sbjct 289864 ACGCTCAAT 289856
>seq119
Length=1526710
Score = 170 bits (188), Expect = 2e-37
Identities = 367/542 (68%), Gaps = 15/542 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| |
Sbjct 630500 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 630441
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || || | | || ||| | |||||
Sbjct 630440 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 630381
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || ||||| || || || ||||| ||||||||||||||| | | || ||
Sbjct 630380 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 630321
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | ||||| || || ||||| || |||||||| ||
Sbjct 630320 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 630262
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| || | ||| | ||||||||||| ||||||| ||| | ||
Sbjct 630261 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 630202
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438
| ||| | | ||||| ||| | || || || || || | | |||| |
Sbjct 630201 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 630146
Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497
||||||||||| || ||||| || | | ||| |||| |||| | | || | |
Sbjct 630145 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTTGCTCAGCGTCTTGTT 630087
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| |
Sbjct 630086 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 630027
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||| ||||||| ||| || ||| | || || || || |||
Sbjct 630026 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 629967
Query 61618 GG 61619
||
Sbjct 629966 GG 629965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566609381680
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