Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq180 286 3e-72 seq119 170 2e-37 >seq180 Length=606450 Score = 286 bits (316), Expect = 3e-72 Identities = 1128/1749 (64%), Gaps = 48/1749 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | |||||| |||| || | || ||||||||||| || Sbjct 291571 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 291512 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| || ||| ||||| | || | || |||| | | || Sbjct 291511 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 291454 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| |||||| ||| | |||||| || |||||| Sbjct 291453 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 291394 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | | | || || |||||||| || ||||||||||| | | | | ||| Sbjct 291393 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 291335 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | |||| ||||| ||||| | ||||| ||||| || ||| Sbjct 291334 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 291275 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||| | ||||| |||| ||||| |||| ||| | | |||| || Sbjct 291274 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 291217 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | || || || || ||||||||||| ||| || |||||| || Sbjct 291216 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 291157 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | |||| || || ||||| ||||| || | || | Sbjct 291156 TCGTTGTTGCCAAGAATCTGCGAAGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 291097 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | |||| | | | | | || | ||||||| ||| | ||| Sbjct 291096 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 291039 Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 | | ||||| | ||||| || || || | || | ||| || || | Sbjct 291038 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 290985 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728 | ||| | ||| || |||||||| || ||||| |||| | | || || Sbjct 290984 CCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTTGCACAGACGTAGTA-AGGGCA 290926 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || || ||||||||||| || | || || ||||| |||||| ||| | Sbjct 290925 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 290866 Query 65789 GGCATACCCATCAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 ||||| | | || ||| | | || || |||||||| || |||| ||| ||||| Sbjct 290865 GGCATGCGGA---GGGCAAGGAAGGCATCAGCAAGACCTTGCACACCAAGACCAATGGGT 290809 Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 || ||||||| ||| | ||||| | |||||||||| |||| ||||| || Sbjct 290808 CGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATC 290749 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATG 65964 ||||||||||| || || || || ||| ||| | | ||| || Sbjct 290748 TTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG----- 290695 Query 65965 TTTAGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG-CAAGAGATGCGAGG 66022 ||| | | ||| | | | | || ||| || | |||| || || ||| Sbjct 290694 --TAGCAAGCATCTTCATAGTTG------ATGAAAGAGGGCAGAGACAAG-GAGGCAAGG 290644 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| ||||| | ||| ||||| ||| || || | || || |||||||| || | Sbjct 290643 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 290584 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | || ||||| || | |||| ||| ||||||||||||||||| ||||||||| | | Sbjct 290583 CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGC 290524 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 ||| | || | |||||||| |||| ||||| ||||||| |||||| | ||| Sbjct 290523 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCC 290464 Query 66203 TTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261 || | | || | | |||| ||| | | ||||| | |||||| || || || Sbjct 290463 TTGATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTC 290405 Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 ||||| | || | || | || || | || || ||||| || | ||| || || Sbjct 290404 GTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCC 290345 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | || ||||| ||| || |||||||| ||||| || || |||| || || || Sbjct 290344 GTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACG 290285 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || |||||| | |||||||| || || | || |||||||| |||| |||||| Sbjct 290284 AGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGC 290225 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 |||||||| || |||||||||||||| | || || ||| ||||| ||||| || Sbjct 290224 GTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAAC 290165 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 ||| ||||| |||||||| ||||||| ||| || |||| ||||| || | ||||| Sbjct 290164 GTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATT 290105 Query 66562 GGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621 ||| ||| ||||| || || || || || ||| | |||| ||||||||||| Sbjct 290104 GGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACC 290045 Query 66622 GGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 ||| |||| || || |||||| | || | | || || |||||| ||| Sbjct 290044 AGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTC 289985 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 |||| || | ||| ||||||| ||| || || | || || |||| ||| Sbjct 289984 CTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAA 289925 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 | ||||| | || || || ||| | | || |||||| ||||| ||||| | ||| Sbjct 289924 TAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGAC 289865 Query 66802 AGCATCAAT 66810 | ||||| Sbjct 289864 ACGCTCAAT 289856 >seq119 Length=1526710 Score = 170 bits (188), Expect = 2e-37 Identities = 367/542 (68%), Gaps = 15/542 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| | Sbjct 630500 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 630441 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | || ||| | ||||| Sbjct 630440 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 630381 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| ||||||||||||||| | | || || Sbjct 630380 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 630321 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||| || |||||||| || Sbjct 630320 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 630262 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| || | ||| | ||||||||||| ||||||| ||| | || Sbjct 630261 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 630202 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | ||| | | ||||| ||| | || || || || || | | |||| | Sbjct 630201 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 630146 Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 ||||||||||| || ||||| || | | ||| |||| |||| | | || | | Sbjct 630145 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTTGCTCAGCGTCTTGTT 630087 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| | Sbjct 630086 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 630027 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| ||||||| ||| || ||| | || || || || ||| Sbjct 630026 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 629967 Query 61618 GG 61619 || Sbjct 629966 GG 629965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566609381680