Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq231 376 1e-101 seq212 338 3e-90 seq22 95.1 5e-17 seq1 80.6 1e-12 >seq231 Length=3843 Score = 376 bits (416), Expect = 1e-101 Identities = 280/325 (86%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 360 CTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAA 419 ||||||| ||||| | || ||||||||||||||||||| | | || ||||||||| || Sbjct 3843 CTGAGGTTCGCGCATCTGCAAGGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAA 3784 Query 420 CACGGACCAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478 |||||||||||||||| | || |||||||||||| ||||||||||||| | ||||||| Sbjct 3783 CACGGACCAAGGAGTCGT-CTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAA 3725 Query 479 TGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTC 538 |||||||||||| ||||| || | || ||| ||||||||||||||||||| || Sbjct 3724 TGAAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCTGATGTTCTC 3669 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 ||||||||||||||||||||||| | |||||||||||| ||||||||||||||| | Sbjct 3668 GGATGGATTTGAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTA 3609 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3608 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGA 3549 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| |||| || ||||||| Sbjct 3548 TCGTCAAATATGGGCATGGGGGCGA 3524 >seq212 Length=5509 Score = 338 bits (374), Expect = 3e-90 Identities = 273/325 (84%), Gaps = 5/325 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 333 TGTAAAGTTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 274 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 273 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 214 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || Sbjct 213 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 154 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 |||||||||| | ||| ||| | || ||| || ||||||| ||| | | Sbjct 153 ATGACCAGACTTGGGCTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC--CAG 97 Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 | |||||||||||||| | | | |||||||| | |||||||||||| | |||||| Sbjct 96 TCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGACTTCGGGAATGTGGCTCTCTTCGG 37 Query 321 GGGGTGTTATAGCCCGGGGTGGAAT 345 || ||||||||||||| ||| ||| Sbjct 36 GGAGTGTTATAGCCCGTTGTGTAAT 12 >seq22 Length=334007 Score = 95.1 bits (104), Expect = 5e-17 Identities = 106/140 (76%), Gaps = 5/140 (4%) Strand=Plus/Plus Query 456 GGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCAC 515 |||||||||| || | ||||||||||||||||||| ||||||| | | | ||| Sbjct 25014 GGGTGTCAAAACCATCCGCGTAATGAAAGTGAACGCGGGTGGGA----GCGTCGACGCAT 25069 Query 516 CATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCG 575 |||| ||||||| || | |||||||||||||||||| |||||| | || | | || Sbjct 25070 CATCAGCCGATCCCAATATTCTCGGATGGATTTGAGTAAAAGCATA-CGGTACCGGCGCG 25128 Query 576 AAAGATGGTGAACTATGCCT 595 |||| |||||| |||| || Sbjct 25129 AAAGCAGGTGAAATATGACT 25148 >seq1 Length=5319023 Score = 80.6 bits (88), Expect = 1e-12 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 362 GAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACA 421 ||||| |||| | || ||||||||||||||||||| | | || ||||||||| |||| Sbjct 1674776 GAGGTTGGCGCATCTGCAAGGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACA 1674835 Query 422 CGGACCAAGGAGTCTAACATC-TATGCGAGT 451 |||||||||||||| | || ||||||||| Sbjct 1674836 CGGACCAAGGAGTC-GTCTTCGTATGCGAGT 1674865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079991226950