Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15 338 5e-88 seq4 210 2e-49 >seq15 Length=1128247 Score = 338 bits (374), Expect = 5e-88 Identities = 1219/1880 (65%), Gaps = 50/1880 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| |||||||||||||| Sbjct 833450 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 833391 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||||||| ||| || | ||| ||||| | | || |||| | | || Sbjct 833390 CTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTCG-TGATCTTGCCCATCGTGGGG 833333 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| || || |||||| ||| | ||| ||||| |||||| Sbjct 833332 TCCTTCATGTGGATGTTCAGTGATTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 833273 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | || | || || |||||||| || ||||| || ||| | | | || || Sbjct 833272 ATCTGGACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATATAGG-GCCTTGACATC 833214 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 833213 GGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCAT 833154 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 833153 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 833096 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| | Sbjct 833095 TGGAACTCACCAGCGAGAACACGGCGCTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 833036 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| |||| |||| ||||| ||||| ||||| | | || | Sbjct 833035 TCGTTGTTGCCCAGAATCTGGGAAGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 832976 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | | | | || | | || ||||||| ||| | | | Sbjct 832975 TTACGGATACCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTC 832920 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | ||| |||||| || || ||| | || | ||| || ||||| Sbjct 832919 AGAG--GGCTTG-ACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGAGAACC 832863 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 ||| | ||| ||||||||||| || || || | || ||| || || Sbjct 832862 CTTGAAGGTGGAGTAGGGGCCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGCAGC 832803 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 |||||||||||| || || | || || ||||| ||||| |||| | || Sbjct 832802 GTGATAAATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGG 832743 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||||| || | |||| ||||| || || ||||| |||| ||| ||||| || || Sbjct 832742 CATACGCAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 832683 Query 65851 ACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 832682 GCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTG 832625 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 |||| ||||| | || || || || |||| | | ||| || || Sbjct 832624 TTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCG-------TA 832572 Query 65969 GGACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 | | | |||| || | || ||| || | ||||| || ||||| Sbjct 832571 GCAAGCCTCATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAGGCAAGGTT 832521 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||||||||| | |||||| || || ||||||| |||||| ||||| || || | Sbjct 832520 GCAGACAGCGACCTCGTCGGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAACT 832461 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || ||||| || | |||| ||| || |||||||| ||||| ||||||||||| | ||| Sbjct 832460 ACGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCAT 832401 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | ||||||||| |||| ||||| ||||||| ||| || | ||||| Sbjct 832400 GAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTT 832341 Query 66205 CACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | || | | | |||| | | | | ||||| | |||||| || ||||| | Sbjct 832340 AATGGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCT 832282 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 | || | |||| || | || |||| | || |||||||| | ||| ||||| | Sbjct 832281 CTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATCAGTGTCCAGTCACCGT 832222 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 || ||| ||||| ||| || |||||||| ||||| ||||| ||| || || || | Sbjct 832221 TCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGG 832162 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || |||||| | ||||| || || || | || |||||||| |||| || | | Sbjct 832161 CACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGT 832102 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || || ||||||||||| || | || || ||| ||| || |||||||| | Sbjct 832101 GCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACAT 832042 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 | ||||| |||||||||||||| | ||| || || | || || ||| | || |||| Sbjct 832041 ACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGG 831982 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | ||| ||||| || || || || ||| ||| |||||||||||||||||||| | Sbjct 831981 TACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACCAATACCACCAG 831922 Query 66624 CCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 || |||| ||||| ||||| || | | | || | | || || ||||| ||| Sbjct 831921 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGTC 831864 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 | |||| || | | | |||| || | |||||| | || ||| |||| ||| Sbjct 831863 ATCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAA 831804 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 ||| ||||| | ||| ||||| ||| | | || |||||| |||||| ||||| | ||| Sbjct 831803 GAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 831744 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCC 66860 || || | || || || || | | |||| ||||| | | || ||||| | Sbjct 831743 TCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGGGC 831685 Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 | ||||| | | | | | || | | | ||| || || |||| ||||||| |||| Sbjct 831684 GCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAA 831625 Query 66921 AGTACGAGTAATTGAAATCG 66940 |||| ||| | ||||||| Sbjct 831624 AGTATTGGTATTGGAAATCG 831605 >seq4 Length=3324183 Score = 210 bits (232), Expect = 2e-49 Identities = 571/862 (66%), Gaps = 34/862 (4%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 1758740 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1758681 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | || | ||| | || ||| | Sbjct 1758680 TCCAAGGATCTCCACGACTGGAACAACCGCCT---GACTGCTGACGAGCAGTTCTTCGTC 1758624 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 ||| | | || ||||| || || || || || || ||||| ||||| | | || Sbjct 1758623 TCTCATATCCTTGCTTTCTTCGCTGCCTCAGATGGCATTGTCAACGAGAACCTCGTCGAG 1758564 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 |||||| ||||| || | | ||||| ||||| ||||||||||||||||| Sbjct 1758563 CGTTTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 1758504 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| | ||||| |||| ||| | |||||||| || ||||||| ||||| Sbjct 1758503 ATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGCCC 1758444 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG- 61438 || | || | | | | ||||| ||||| || || || || || | | ||||| Sbjct 1758443 GCCCAGCGA-ACCTACCTCTTCAACGCCATTGACACTATTCCC----TGCATCCGAAAGA 1758389 Query 61439 ---CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATT 61493 | || |||||| || |||||| ||| | || | || | |||| | || | Sbjct 1758388 AGGCTGACTGGGCCATCCGATGGATC--CAGGATAAGGACTCCTCCTTTGCCCAGCGTCT 1758331 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || || || | || |||||| | || |||||||| | || ||| | ||||| || Sbjct 1758330 CGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTG 1758271 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| ||||| || |||||||||||||| ||| ||| ||| | || || || || Sbjct 1758270 GCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGA 1758211 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 |||||| | || ||| ||||| ||| || | || || | || || | Sbjct 1758210 CGAGGGTCTTCACACTGACTTTGC----CTGC--CTCCTCCACTCTCACCTCAAGGGT-C 1758158 Query 61674 GTCGGAG-GAGCGTGTGGGT---GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAAT 61729 || || ||| || | || || || ||| || || || || || ||||| | Sbjct 1758157 GTGCCAGCAAGCAGATGATTCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGT 1758098 Query 61730 TTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGT 61789 | || ||||| ||| | ||| | ||| |||||||||| | || || ||| ||||| Sbjct 1758097 TCCTCACTGAGGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGT 1758038 Query 61790 ATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATA 61849 | ||||| || || || || ||||| | |||| | | || | || | |||| || Sbjct 1758037 ACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGG 1757978 Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCG 61909 | | ||||| || || |||||||| | || || || | |||||||| || || |||| Sbjct 1757977 CCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCG 1757918 Query 61910 AGAAACGTGTAGGCGACTATCA 61931 |||| ||||| | |||||| || Sbjct 1757917 AGAAGCGTGTTGCCGACTACCA 1757896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566018247760