Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001703125.1_202016-08-10]
1,978 sequences; 48,996,880 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 473 2e-131
>seq1669
Length=7871
Score = 473 bits (524), Expect = 2e-131
Identities = 294/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||| ||| || |||||||||||||||||||| ||||||
Sbjct 360 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 419
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||| |||||||||||||||| || | |||||||| |||||||||||||
Sbjct 420 AACAGGACTTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 479
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 539
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 540 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 599
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 600 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 658
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 659 ACGAAAGTTAGGGG 672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915181897344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |