Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001703125.1_202016-08-10]
1,978 sequences; 48,996,880 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 798 0.0
>seq1669
Length=7871
Score = 798 bits (884), Expect = 0.0
Identities = 500/537 (93%), Gaps = 5/537 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 4596 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 4537
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 4536 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGCTC 4477
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || || |||| ||||||||||||
Sbjct 4476 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGT--AAATCCAGCGCCGCTTCATTGA 4419
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 4418 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 4362
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 4361 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 4302
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4301 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 4242
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4241 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 4182
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 4181 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 4122
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4121 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 4065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635167655744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |