Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001703125.1_202016-08-10]
1,978 sequences; 48,996,880 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 437 3e-120
>seq1669
Length=7871
Score = 437 bits (484), Expect = 3e-120
Identities = 283/308 (92%), Gaps = 8/308 (3%)
Strand=Plus/Minus
Query 197 TCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTC 256
||||||||||| || |||||||| |||||||||||||| ||||||||||||||||
Sbjct 7871 TCGAAAGTTGAAAG-----AAATTTGA--GAACCATCGCCGGCACAAGGCCATGCGATTC 7819
Query 257 GTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAAT 316
| |||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||
Sbjct 7818 GAGGAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAAT 7759
Query 317 ACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATC 376
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 7758 ACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATC 7699
Query 377 CATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA 436
|| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 7698 CAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCG 7639
Query 437 CTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 496
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7638 CGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 7580
Query 497 ACTGGCAG 504
||||||||
Sbjct 7579 ACTGGCAG 7572
Score = 295 bits (326), Expect = 2e-77
Identities = 187/203 (92%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 203 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 144
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 143 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 84
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 83 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 24
Query 181 GGCCACTATCCTACCATCGAAAG 203
||||| || || | |||||||||
Sbjct 23 GGCCAATACCCAAACATCGAAAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510370124288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |