Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001703125.1_202016-08-10] 1,978 sequences; 48,996,880 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1669 437 3e-120 >seq1669 Length=7871 Score = 437 bits (484), Expect = 3e-120 Identities = 283/308 (92%), Gaps = 8/308 (3%) Strand=Plus/Minus Query 197 TCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTC 256 ||||||||||| || |||||||| |||||||||||||| |||||||||||||||| Sbjct 7871 TCGAAAGTTGAAAG-----AAATTTGA--GAACCATCGCCGGCACAAGGCCATGCGATTC 7819 Query 257 GTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAAT 316 | |||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct 7818 GAGGAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAAT 7759 Query 317 ACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATC 376 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 7758 ACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATC 7699 Query 377 CATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA 436 || ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 7698 CAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCG 7639 Query 437 CTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 496 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7638 CGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 7580 Query 497 ACTGGCAG 504 |||||||| Sbjct 7579 ACTGGCAG 7572 Score = 295 bits (326), Expect = 2e-77 Identities = 187/203 (92%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 144 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 143 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 84 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 83 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 24 Query 181 GGCCACTATCCTACCATCGAAAG 203 ||||| || || | ||||||||| Sbjct 23 GGCCAATACCCAAACATCGAAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510370124288