Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27] 1,277 sequences; 50,403,639 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1145 439 1e-120 >seq1145 Length=7875 Score = 439 bits (486), Expect = 1e-120 Identities = 367/443 (83%), Gaps = 10/443 (2%) Strand=Plus/Minus Query 243 CCGGTGCACTCTTCTGCGGTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCG 301 || ||||||| ||| | ||| ||||||||||||| | | | |||||||||| || Sbjct 7857 CCAGTGCACTTTTC--CAGTCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGGCGGCG 7800 Query 302 GGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACT 361 |||||||||| | |||||||| |||||||||||| ||| ||| | | | ||||| Sbjct 7799 GGAATGTGGCTCTCTTCGGGGAGTGTTATAGCCCACCGTGTAATACC-CTGGGGGGGACT 7741 Query 362 GAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACA 421 ||||| ||||| | || ||||||||||||||||||| | | || ||||||||| |||| Sbjct 7740 GAGGTTCGCGCATCTGCAAGGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACA 7681 Query 422 CGGACCAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATG 480 |||||||||||||| | || |||||||||||| ||||||||||||| | ||||||||| Sbjct 7680 CGGACCAAGGAGTCGT-CTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATG 7622 Query 481 AAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG 540 |||||||||| ||||| || | || ||| ||||||||||||||||||| |||| Sbjct 7621 AAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCTGATGTTCTCGG 7566 Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 ||||||||||||||||||||| | |||||||||||| ||||||||||||||| ||| Sbjct 7565 ATGGATTTGAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATA 7506 Query 601 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 7505 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATC 7446 Query 661 GTCAAATTTGGGTATAGGGGCGA 683 ||||||| |||| || ||||||| Sbjct 7445 GTCAAATATGGGCATGGGGGCGA 7423 Score = 280 bits (310), Expect = 6e-73 Identities = 178/193 (92%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||| ||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 202 TGTAAAGTTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 143 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 142 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 83 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || Sbjct 82 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 23 Query 203 GCAACCAGACTTG 215 |||||||||| Sbjct 22 ATGACCAGACTTG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079972608350