Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27]
1,277 sequences; 50,403,639 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 91.5 4e-16
>seq1001
Length=47534
Score = 91.5 bits (100), Expect = 4e-16
Identities = 140/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||| | | ||| |||||||| || | || | ||||||| | |||||| |||
Sbjct 4756 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 4815
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
| | |||||| | || ||| | || | |||| |||| || ||| | | | | | ||
Sbjct 4816 CTAAACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATATAAATT 4875
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||||||||||| || ||||||| ||||| | ||| ||||||||||| |||
Sbjct 4876 TTAAGGATTGTAGTCTGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 4935
Query 471 AGCATGCTACGGTGAATA 488
| |||| ||||||||||
Sbjct 4936 ACCATGTCACGGTGAATA 4953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503980793920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |