Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27]
1,277 sequences; 50,403,639 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1145 367 2e-99
seq657 77.0 5e-12
>seq1145
Length=7875
Score = 367 bits (406), Expect = 2e-99
Identities = 239/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1269
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 1270 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 1328
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 1329 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 1387
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1388 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1447
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 1448 AAAGAGCTCTCAATCTGTC 1466
>seq657
Length=294364
Score = 77.0 bits (84), Expect = 5e-12
Identities = 50/55 (91%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTC 196
||||||||||||||||||||||||||||||| | ||| || ||| ||||||||||
Sbjct 53305 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATTGCAATCAAGCAGGCAAATCACTC 53359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796790142837
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |