Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27] 1,277 sequences; 50,403,639 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq315 127 8e-24 >seq315 Length=257681 Score = 127 bits (140), Expect = 8e-24 Identities = 218/314 (69%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| ||| || ||||| || | | ||| || ||||| || | ||||||||| Sbjct 198556 AACATCGTAGTAGATGACGTTCATACCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 198497 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || ||||| || ||||| |||| || || | || || | ||| Sbjct 198496 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 198438 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| ||||| |||| | || ||| || ||| |||| |||||| | || Sbjct 198437 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGATCGCCAAGCTGACGGGCAA 198378 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 || || | | | |||| ||||| || || || | | |||| ||||| || | Sbjct 198377 GAACGATGATCTCGGCGATGACCAGCTCAGCGACACTGCGTGAGTTGGCGAAGGGGGAGT 198318 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031 | ||||| ||||| || |||| ||| | || || | ||||| | | ||| || | Sbjct 198317 TGAAGACGGCAATACCATTCTTGGCAGCGAACTCAAGGTCGACCTGGTTGGTACCGATAC 198258 Query 13032 AGAAGCATCCTATG 13045 ||||||| || ||| Sbjct 198257 AGAAGCAGCCGATG 198244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884855560313361